Variant report
Variant | rs4240203 |
---|---|
Chromosome Location | chr2:86174180-86174181 |
allele | G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr2:86103419..86105731-chr2:86172011..86174482,2 | MCF-7 | breast: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs1000374 | 1.00[AFR][1000 genomes] |
rs10166563 | 0.92[EUR][1000 genomes] |
rs10194524 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs11673740 | 0.88[CEU][hapmap];1.00[AFR][1000 genomes] |
rs11674097 | 1.00[CEU][hapmap];1.00[AFR][1000 genomes] |
rs11674128 | 1.00[AFR][1000 genomes] |
rs11674537 | 1.00[AFR][1000 genomes] |
rs11674561 | 1.00[AFR][1000 genomes] |
rs11675032 | 1.00[AFR][1000 genomes] |
rs11677643 | 1.00[AFR][1000 genomes] |
rs11679818 | 1.00[AFR][1000 genomes] |
rs11680472 | 1.00[AFR][1000 genomes] |
rs11681094 | 1.00[AFR][1000 genomes] |
rs11681915 | 1.00[CEU][hapmap];1.00[AFR][1000 genomes] |
rs11682180 | 1.00[AFR][1000 genomes] |
rs11682653 | 1.00[AFR][1000 genomes] |
rs11683378 | 1.00[AFR][1000 genomes] |
rs11683466 | 1.00[AFR][1000 genomes] |
rs11684014 | 0.87[CEU][hapmap] |
rs11688602 | 0.88[CEU][hapmap] |
rs11689889 | 1.00[CEU][hapmap];1.00[AFR][1000 genomes] |
rs11690193 | 0.88[CEU][hapmap];1.00[AFR][1000 genomes] |
rs11690888 | 1.00[AFR][1000 genomes] |
rs11694341 | 1.00[AFR][1000 genomes] |
rs11899219 | 0.88[CEU][hapmap] |
rs12714155 | 1.00[AFR][1000 genomes];0.89[EUR][1000 genomes] |
rs1469983 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs17026728 | 0.87[CEU][hapmap] |
rs1808822 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes] |
rs1814422 | 1.00[AFR][1000 genomes] |
rs2083169 | 1.00[AFR][1000 genomes];0.89[EUR][1000 genomes] |
rs2218037 | 1.00[AFR][1000 genomes];0.89[EUR][1000 genomes] |
rs2280313 | 1.00[AFR][1000 genomes] |
rs2366951 | 1.00[AFR][1000 genomes];0.91[EUR][1000 genomes] |
rs2366954 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs2366960 | 0.98[EUR][1000 genomes] |
rs2438307 | 0.87[CEU][hapmap] |
rs2577783 | 0.89[EUR][1000 genomes] |
rs2679723 | 1.00[CEU][hapmap];0.89[EUR][1000 genomes] |
rs2679724 | 1.00[CEU][hapmap];1.00[AFR][1000 genomes];0.91[EUR][1000 genomes] |
rs2886821 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs3770092 | 1.00[CEU][hapmap];1.00[AFR][1000 genomes] |
rs3770093 | 0.88[CEU][hapmap] |
rs4832224 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs4832225 | 0.94[EUR][1000 genomes] |
rs4832229 | 1.00[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs57187218 | 1.00[AFR][1000 genomes] |
rs57648087 | 1.00[AFR][1000 genomes] |
rs58315750 | 1.00[AFR][1000 genomes] |
rs58383548 | 1.00[AFR][1000 genomes] |
rs58829348 | 1.00[AFR][1000 genomes] |
rs59317756 | 1.00[AFR][1000 genomes] |
rs59500769 | 1.00[AFR][1000 genomes] |
rs6547645 | 0.94[EUR][1000 genomes] |
rs6547648 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes] |
rs6748083 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs893443 | 1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs893444 | 1.00[AFR][1000 genomes];0.81[EUR][1000 genomes] |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr2:86172800-86176200 | Weak transcription | HepG2 | liver |
2 | chr2:86173400-86175800 | Weak transcription | Liver | Liver |