The 2.0 version of rSNPBase

Variant report

Variant rs11689889
Chromosome Location chr2:86095529-86095530
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86066000-86106200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:86067000-86099000 Weak transcription Gastric stomach
3 chr2:86071800-86096200 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr2:86072000-86096800 Weak transcription Psoas Muscle Psoas
5 chr2:86075400-86114000 Weak transcription Aorta Aorta
6 chr2:86079600-86106200 Weak transcription Brain Germinal Matrix brain
7 chr2:86081000-86112400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr2:86081600-86099200 Weak transcription Left Ventricle heart
9 chr2:86081600-86100600 Weak transcription NHDF-Ad bronchial
10 chr2:86082000-86099000 Weak transcription Right Ventricle heart
11 chr2:86086800-86113000 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr2:86087400-86096800 Weak transcription NHEK skin
13 chr2:86087400-86101800 Weak transcription Fetal Brain Female brain
14 chr2:86088200-86099000 Weak transcription Adipose Nuclei Adipose
15 chr2:86088400-86105400 Weak transcription Osteobl bone
16 chr2:86088600-86111600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr2:86089000-86102600 Weak transcription Primary hematopoietic stem cells blood
18 chr2:86089800-86100000 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr2:86089800-86106000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr2:86089800-86106000 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr2:86090400-86096000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr2:86090400-86097400 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr2:86090400-86099800 Weak transcription Spleen Spleen
24 chr2:86090400-86102600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr2:86090400-86104600 Weak transcription Liver Liver
26 chr2:86090600-86096200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr2:86090600-86096200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chr2:86090600-86096800 Weak transcription Fetal Muscle Leg muscle
29 chr2:86090600-86097200 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr2:86090600-86109000 Weak transcription Fetal Stomach stomach
31 chr2:86090600-86110600 Weak transcription Fetal Muscle Trunk muscle
32 chr2:86090800-86096000 Weak transcription Primary monocytes fromperipheralblood blood
33 chr2:86091400-86101400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr2:86092200-86096800 Weak transcription Lung lung
35 chr2:86092200-86105200 Weak transcription Right Atrium heart
36 chr2:86093200-86096200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr2:86093200-86097400 Weak transcription Stomach Smooth Muscle stomach
38 chr2:86093200-86106200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr2:86093400-86104600 Weak transcription Ovary ovary
40 chr2:86093400-86105800 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr2:86093400-86106200 Weak transcription Duodenum Mucosa Duodenum
42 chr2:86093400-86106800 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr2:86093400-86112400 Weak transcription Colonic Mucosa Colon
44 chr2:86093600-86096400 Enhancers K562 blood
45 chr2:86093600-86096800 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr2:86093600-86111600 Weak transcription Colon Smooth Muscle Colon
47 chr2:86093800-86096600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr2:86093800-86096800 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr2:86093800-86096800 Weak transcription Dnd41 blood
50 chr2:86093800-86106000 Weak transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015