Variant report

Variant	rs2886821
Chromosome Location	chr2:86168270-86168271
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:86167637..86170069-chr2:86171066..86173943,2	K562	blood:

Extended variants
information (count: 58 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:58)

rs_ID	r²[population]
rs1000374	1.00[AFR][1000 genomes]
rs10166563	0.96[EUR][1000 genomes]
rs10194524	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11673740	0.88[CEU][hapmap];1.00[AFR][1000 genomes]
rs11674097	1.00[CEU][hapmap];1.00[AFR][1000 genomes]
rs11674128	1.00[AFR][1000 genomes]
rs11674537	1.00[AFR][1000 genomes]
rs11674561	1.00[AFR][1000 genomes]
rs11675032	1.00[AFR][1000 genomes]
rs11677643	1.00[AFR][1000 genomes]
rs11679818	1.00[AFR][1000 genomes]
rs11680472	1.00[AFR][1000 genomes]
rs11681094	1.00[AFR][1000 genomes]
rs11681915	1.00[CEU][hapmap];1.00[AFR][1000 genomes]
rs11682180	1.00[AFR][1000 genomes]
rs11682653	1.00[AFR][1000 genomes]
rs11683378	1.00[AFR][1000 genomes]
rs11683466	1.00[AFR][1000 genomes]
rs11684014	0.87[CEU][hapmap]
rs11688602	0.88[CEU][hapmap]
rs11689889	1.00[CEU][hapmap];1.00[AFR][1000 genomes]
rs11690193	0.88[CEU][hapmap];1.00[AFR][1000 genomes]
rs11690888	1.00[AFR][1000 genomes]
rs11694341	1.00[AFR][1000 genomes]
rs11899219	0.88[CEU][hapmap]
rs12714155	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs1469983	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17026728	0.87[CEU][hapmap]
rs1808822	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1814422	1.00[AFR][1000 genomes]
rs2083169	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs2218037	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs2280313	1.00[AFR][1000 genomes]
rs2366951	1.00[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs2366954	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2366960	0.94[EUR][1000 genomes]
rs2438307	0.87[CEU][hapmap]
rs2577783	0.85[EUR][1000 genomes]
rs2679723	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs2679724	1.00[CEU][hapmap];1.00[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs3770092	1.00[CEU][hapmap];1.00[AFR][1000 genomes]
rs3770093	0.88[CEU][hapmap]
rs4240203	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4832224	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4832225	0.90[EUR][1000 genomes]
rs4832229	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs57187218	1.00[AFR][1000 genomes]
rs57648087	1.00[AFR][1000 genomes]
rs58315750	1.00[AFR][1000 genomes]
rs58383548	1.00[AFR][1000 genomes]
rs58829348	1.00[AFR][1000 genomes]
rs59317756	1.00[AFR][1000 genomes]
rs59500769	1.00[AFR][1000 genomes]
rs6547645	0.90[EUR][1000 genomes]
rs6547648	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6748083	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs893443	1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs893444	1.00[AFR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:86164200-86169200	Weak transcription	Pancreas	Pancrea
2	chr2:86164200-86169400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr2:86164800-86168400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr2:86167600-86168400	Enhancers	Liver	Liver

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