Variant report

Variant	rs8017718
Chromosome Location	chr14:68347517-68347518
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 117 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:117)

rs_ID	r²[population]
rs10130605	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10130837	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10132828	1.00[AMR][1000 genomes]
rs10133485	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10133652	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs10134988	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10135316	1.00[AMR][1000 genomes]
rs10135925	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10137712	1.00[EUR][1000 genomes]
rs10142687	0.95[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs10142929	0.95[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs10144128	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10145884	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10146113	1.00[AMR][1000 genomes]
rs10146189	1.00[AMR][1000 genomes]
rs10146766	1.00[EUR][1000 genomes]
rs10146831	1.00[EUR][1000 genomes]
rs10148893	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10150330	1.00[EUR][1000 genomes]
rs10450891	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10467819	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs1073024	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1073025	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1073026	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1118397	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17104663	0.85[ASN][1000 genomes]
rs17104681	0.92[ASN][1000 genomes]
rs17104689	0.92[ASN][1000 genomes]
rs17104700	0.92[ASN][1000 genomes]
rs17104758	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17104774	1.00[EUR][1000 genomes]
rs17104783	1.00[EUR][1000 genomes]
rs17104786	1.00[EUR][1000 genomes]
rs17104793	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17104796	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17104799	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17104827	1.00[AMR][1000 genomes]
rs17783202	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2180537	1.00[EUR][1000 genomes]
rs28396172	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs28405326	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28434770	1.00[EUR][1000 genomes]
rs28444090	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28473357	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs28516665	1.00[EUR][1000 genomes]
rs28697984	0.92[ASN][1000 genomes]
rs28701947	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28751961	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs28757308	1.00[EUR][1000 genomes]
rs28816808	1.00[EUR][1000 genomes]
rs28833913	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs28835585	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28847917	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28896907	1.00[EUR][1000 genomes]
rs34663731	0.92[ASN][1000 genomes]
rs34700596	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34768780	0.92[ASN][1000 genomes]
rs34787467	0.92[ASN][1000 genomes]
rs35588855	0.92[ASN][1000 genomes]
rs35608268	0.84[EUR][1000 genomes]
rs35927243	0.92[ASN][1000 genomes]
rs3742884	0.85[ASN][1000 genomes]
rs4899226	0.95[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs4899228	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4899229	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902523	0.95[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs4902525	0.84[AFR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4902529	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902530	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902531	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902532	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4902534	1.00[EUR][1000 genomes]
rs4902537	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4902541	0.85[EUR][1000 genomes]
rs4902543	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs58159602	0.85[ASN][1000 genomes]
rs60014063	1.00[EUR][1000 genomes]
rs6573802	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7140987	1.00[EUR][1000 genomes]
rs7141203	0.92[ASN][1000 genomes]
rs7143377	0.92[ASN][1000 genomes]
rs7143521	0.92[ASN][1000 genomes]
rs7147296	1.00[EUR][1000 genomes]
rs7149122	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7149351	0.92[ASN][1000 genomes]
rs7149356	0.92[ASN][1000 genomes]
rs7149360	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7149460	1.00[EUR][1000 genomes]
rs7149796	0.95[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs7150467	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7150860	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7151035	0.95[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs7152445	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7152727	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7153470	1.00[EUR][1000 genomes]
rs7156492	0.85[ASN][1000 genomes]
rs7157720	0.86[EUR][1000 genomes]
rs7159786	0.92[ASN][1000 genomes]
rs8003181	1.00[EUR][1000 genomes]
rs8006175	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs8007989	0.95[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs8008791	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8012665	0.85[ASN][1000 genomes]
rs8014844	1.00[EUR][1000 genomes]
rs8015520	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8015595	0.95[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs8015741	1.00[EUR][1000 genomes]
rs8016246	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8016563	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8017930	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8018883	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8019420	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8020512	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9652362	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9652363	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9652364	1.00[EUR][1000 genomes]
rs9796374	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68324600-68354800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr14:68328000-68367800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr14:68331600-68357000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
4	chr14:68334200-68348200	Weak transcription	Lung	lung
5	chr14:68334600-68367600	Weak transcription	Primary B cells from cord blood	blood
6	chr14:68335200-68348000	Weak transcription	Primary hematopoietic stem cells	blood
7	chr14:68342400-68351800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr14:68342600-68347600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
9	chr14:68342800-68348000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
10	chr14:68343800-68356400	Weak transcription	HUES48 Cell Line	embryonic stem cell
11	chr14:68344200-68351000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr14:68345400-68353000	Weak transcription	Fetal Intestine Small	intestine
13	chr14:68347200-68348200	Weak transcription	Primary B cells from peripheral blood	blood
14	chr14:68347400-68347800	Enhancers	GM12878-XiMat	blood
15	chr14:68347400-68348000	Enhancers	iPS-20b Cell Line	embryonic stem cell
16	chr14:68347400-68348200	Weak transcription	Primary T helper cells PMA-I stimulated	--
17	chr14:68347400-68348800	Enhancers	Primary T helper naive cells from peripheral blood	blood

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