Variant report

Variant	rs17104783
Chromosome Location	chr14:68402724-68402725
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:68400277..68402859-chr14:69281865..69283593,2	MCF-7	breast:
2	chr14:68400013..68402896-chr14:69251166..69253884,2	MCF-7	breast:
3	chr14:68401051..68404375-chr14:68404453..68408643,4	K562	blood:
4	chr14:68401750..68403926-chr14:68660111..68662363,2	MCF-7	breast:
5	chr14:68401488..68403854-chr19:8386636..8389269,2	MCF-7	breast:
6	chr14:68401118..68403523-chr14:69259774..69263175,3	K562	blood:
7	chr14:68303849..68305592-chr14:68401335..68404322,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000185650	Chromatin interaction

Extended variants
information (count: 215 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:214)

rs_ID	r²[population]
rs10130605	0.86[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10130837	0.86[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10130997	0.97[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs10131828	0.84[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs10132711	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs10132828	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.84[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs10133262	0.88[JPT][hapmap]
rs10133485	1.00[CEU][hapmap];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10133652	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10134124	0.88[JPT][hapmap]
rs10134320	0.86[JPT][hapmap]
rs10134664	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs10134988	0.85[EUR][1000 genomes]
rs10135046	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs10135256	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.85[YRI][hapmap];0.84[AFR][1000 genomes]
rs10135316	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.96[ASN][1000 genomes]
rs10135925	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.86[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10136129	0.89[JPT][hapmap]
rs10136790	0.89[JPT][hapmap]
rs10137457	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs10137712	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10138719	0.97[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs10140465	0.88[AFR][1000 genomes]
rs10142285	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs10142687	0.92[EUR][1000 genomes]
rs10142929	0.92[EUR][1000 genomes]
rs10143219	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.80[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs10143843	0.89[JPT][hapmap]
rs10143895	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs10144128	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.84[AFR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10144224	1.00[CHB][hapmap];0.88[JPT][hapmap];0.84[YRI][hapmap];0.84[AFR][1000 genomes]
rs10145197	0.88[JPT][hapmap]
rs10145820	0.81[AFR][1000 genomes]
rs10145884	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10146113	0.96[ASN][1000 genomes]
rs10146189	0.80[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs10146719	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs10146766	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10146831	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10147569	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs10147820	0.80[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs10148527	0.89[JPT][hapmap]
rs10148893	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10150330	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10150789	0.89[AFR][1000 genomes]
rs10151123	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs10151317	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.80[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs10450891	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.86[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10467819	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1073024	0.83[AFR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1073025	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1073026	0.86[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11158710	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs11158720	0.85[CHB][hapmap];0.86[JPT][hapmap]
rs11158721	0.86[JPT][hapmap]
rs1118397	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11625742	1.00[CEU][hapmap]
rs11844529	0.88[JPT][hapmap]
rs11844842	0.88[JPT][hapmap]
rs11846344	0.88[JPT][hapmap]
rs11847339	0.88[JPT][hapmap]
rs11850191	0.88[JPT][hapmap]
rs11851991	0.82[CHB][hapmap];0.86[JPT][hapmap]
rs11852180	0.88[JPT][hapmap]
rs12100584	0.88[JPT][hapmap]
rs12431697	0.88[JPT][hapmap]
rs17104681	1.00[CEU][hapmap]
rs17104689	1.00[CEU][hapmap]
rs17104700	1.00[CEU][hapmap]
rs17104758	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17104764	0.89[JPT][hapmap]
rs17104774	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17104776	0.89[JPT][hapmap]
rs17104786	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17104793	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.83[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17104796	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.83[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17104799	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.86[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17104800	0.89[JPT][hapmap]
rs17104823	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs17104824	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs17104827	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.80[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs17104829	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs17104862	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs17104863	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs17104880	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs17104900	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs17104917	0.85[CHB][hapmap];0.86[JPT][hapmap]
rs17104947	0.88[JPT][hapmap]
rs17104953	0.84[JPT][hapmap]
rs17104992	0.88[JPT][hapmap]
rs17105001	0.85[CHB][hapmap];0.88[JPT][hapmap]
rs17783202	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1950766	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs1951411	0.86[JPT][hapmap]
rs1955469	1.00[CEU][hapmap]
rs2057361	0.85[CHB][hapmap];0.86[JPT][hapmap]
rs2180537	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs28396172	0.85[EUR][1000 genomes]
rs28405326	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs28434770	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs28444090	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs28448732	0.85[AFR][1000 genomes]
rs28473357	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs28516665	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs28701947	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs28751570	0.96[ASN][1000 genomes]
rs28751961	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28757308	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2877369	0.88[JPT][hapmap]
rs28816808	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs28833913	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28835585	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28847917	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28869007	0.97[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs28896907	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34700596	0.87[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35608268	0.84[EUR][1000 genomes]
rs3742882	1.00[CEU][hapmap]
rs3742883	1.00[CEU][hapmap]
rs3742885	1.00[CEU][hapmap];0.85[CHB][hapmap]
rs4272963	0.84[YRI][hapmap]
rs4436722	0.88[JPT][hapmap]
rs4899226	0.92[EUR][1000 genomes]
rs4899228	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4899229	1.00[CEU][hapmap];0.94[YRI][hapmap];0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4902523	1.00[CEU][hapmap];0.85[CHB][hapmap];0.82[YRI][hapmap];0.92[EUR][1000 genomes]
rs4902525	0.80[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4902529	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4902530	1.00[CEU][hapmap];0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4902531	1.00[CEU][hapmap];0.84[YRI][hapmap];1.00[EUR][1000 genomes]
rs4902532	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4902534	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4902535	0.88[JPT][hapmap]
rs4902536	0.88[JPT][hapmap]
rs4902537	0.86[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4902538	0.88[JPT][hapmap]
rs4902540	0.88[JPT][hapmap]
rs4902541	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4902543	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4902548	0.86[JPT][hapmap]
rs60014063	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6573802	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6573806	0.97[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs7140987	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7141203	1.00[CEU][hapmap]
rs7142112	0.89[JPT][hapmap]
rs7142210	0.89[JPT][hapmap]
rs7143483	0.84[YRI][hapmap]
rs7143521	1.00[CEU][hapmap]
rs7145385	0.81[YRI][hapmap]
rs7146354	0.89[JPT][hapmap]
rs7147296	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7147522	0.86[JPT][hapmap]
rs7147935	0.86[JPT][hapmap]
rs7148799	0.86[JPT][hapmap]
rs7149122	0.84[EUR][1000 genomes]
rs7149343	0.86[JPT][hapmap]
rs7149360	0.84[EUR][1000 genomes]
rs7149460	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7149796	1.00[CEU][hapmap];0.85[CHB][hapmap];0.84[YRI][hapmap];0.92[EUR][1000 genomes]
rs7150467	0.84[EUR][1000 genomes]
rs7150716	0.85[JPT][hapmap]
rs7150860	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs7151035	0.92[EUR][1000 genomes]
rs7152445	0.84[EUR][1000 genomes]
rs7152727	0.84[EUR][1000 genomes]
rs7153470	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7154228	0.86[JPT][hapmap]
rs7154645	0.82[CHB][hapmap];0.84[JPT][hapmap]
rs7154646	0.88[JPT][hapmap]
rs7154725	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs7155097	0.88[JPT][hapmap]
rs7155840	0.88[JPT][hapmap]
rs7156492	1.00[CEU][hapmap]
rs7157152	0.84[JPT][hapmap]
rs7157185	0.88[JPT][hapmap]
rs7157550	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs7157699	0.81[YRI][hapmap]
rs7157720	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73282485	0.96[ASN][1000 genomes]
rs73284210	0.94[ASN][1000 genomes]
rs7359083	0.85[CHB][hapmap];0.86[JPT][hapmap]
rs8003181	0.95[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8006175	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8007347	0.85[CHB][hapmap];0.86[JPT][hapmap]
rs8007989	1.00[CEU][hapmap];0.85[CHB][hapmap];0.84[YRI][hapmap];0.92[EUR][1000 genomes]
rs8008791	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.86[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8009762	0.84[YRI][hapmap]
rs8010136	0.81[YRI][hapmap]
rs8012493	0.86[JPT][hapmap]
rs8012665	1.00[CEU][hapmap]
rs8014844	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8015520	1.00[EUR][1000 genomes]
rs8015595	1.00[CEU][hapmap];0.85[CHB][hapmap];0.84[YRI][hapmap];0.92[EUR][1000 genomes]
rs8015741	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8016246	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8016525	0.89[JPT][hapmap]
rs8016563	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8017718	1.00[EUR][1000 genomes]
rs8017930	1.00[CEU][hapmap];0.94[YRI][hapmap];0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8018029	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap];0.85[YRI][hapmap];0.87[AFR][1000 genomes]
rs8018883	1.00[EUR][1000 genomes]
rs8019420	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8020512	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.86[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9323501	0.88[JPT][hapmap]
rs932475	1.00[CEU][hapmap]
rs957930	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs9652362	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.86[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9652363	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.86[AFR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9652364	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9672111	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs9672142	0.86[JPT][hapmap]
rs9788517	1.00[CEU][hapmap]
rs9796374	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869154	chr14:68366754-69041768	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:56 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68395400-68408000	Weak transcription	Ovary	ovary
2	chr14:68400200-68404200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr14:68400400-68407000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr14:68400800-68404400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr14:68400800-68405200	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr14:68401000-68406200	Weak transcription	Fetal Muscle Leg	muscle
7	chr14:68401200-68405000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr14:68401200-68407000	Weak transcription	Stomach Mucosa	stomach
9	chr14:68401200-68407200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr14:68401200-68407200	Weak transcription	Brain Anterior Caudate	brain
11	chr14:68401200-68407200	Weak transcription	Duodenum Smooth Muscle	Duodenum
12	chr14:68401400-68403800	Weak transcription	Muscle Satellite Cultured Cells	--
13	chr14:68401400-68404200	Weak transcription	Placenta Amnion	Placenta Amnion
14	chr14:68401400-68404800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr14:68401400-68405600	Weak transcription	Liver	Liver
16	chr14:68401600-68402800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr14:68401600-68402800	Weak transcription	Skeletal Muscle Female	skeletal muscle
18	chr14:68401600-68403400	Weak transcription	NHEK	skin
19	chr14:68401600-68403600	Weak transcription	HUVEC	blood vessel
20	chr14:68401600-68403800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr14:68401600-68404200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr14:68401600-68404800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
23	chr14:68401600-68405400	Weak transcription	Placenta	Placenta
24	chr14:68401600-68406200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
25	chr14:68401600-68406400	Weak transcription	NHDF-Ad	bronchial
26	chr14:68401600-68407000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
27	chr14:68401600-68407000	Weak transcription	Rectal Smooth Muscle	rectum
28	chr14:68401600-68407000	Weak transcription	HSMMtube	muscle
29	chr14:68401600-68407000	Weak transcription	NHLF	lung
30	chr14:68401600-68407200	Weak transcription	Fetal Brain Male	brain
31	chr14:68401600-68407200	Weak transcription	HSMM	muscle
32	chr14:68401600-68407600	Weak transcription	Brain Angular Gyrus	brain
33	chr14:68401600-68407600	Weak transcription	Stomach Smooth Muscle	stomach
34	chr14:68401800-68402800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
35	chr14:68401800-68402800	Weak transcription	HUES6 Cell Line	embryonic stem cell
36	chr14:68401800-68402800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
37	chr14:68401800-68403800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
38	chr14:68401800-68404200	Weak transcription	Fetal Stomach	stomach
39	chr14:68401800-68404400	Weak transcription	Colon Smooth Muscle	Colon
40	chr14:68401800-68406400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
41	chr14:68401800-68407000	Weak transcription	Cortex derived primary cultured neurospheres	brain
42	chr14:68401800-68407000	Weak transcription	Fetal Kidney	kidney
43	chr14:68401800-68407200	Weak transcription	Rectal Mucosa Donor 31	rectum
44	chr14:68401800-68407400	Weak transcription	Brain Germinal Matrix	brain
45	chr14:68401800-68407800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
46	chr14:68402000-68403800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
47	chr14:68402200-68403000	Weak transcription	HUES64 Cell Line	embryonic stem cell
48	chr14:68402200-68403600	Enhancers	Fetal Lung	lung
49	chr14:68402200-68404000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
50	chr14:68402200-68404600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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