Variant report

Variant	rs4902540
Chromosome Location	chr14:68431295-68431296
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:16)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:16 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:68430688..68433129-chr14:68446036..68448949,3	MCF-7	breast:
2	chr14:68421406..68425336-chr14:68430124..68433413,6	MCF-7	breast:
3	chr14:68429320..68431742-chr14:68549639..68551221,2	MCF-7	breast:
4	chr14:68431169..68433591-chr14:68443771..68448104,4	MCF-7	breast:
5	chr14:68407844..68414968-chr14:68428702..68432615,7	MCF-7	breast:
6	chr14:68430008..68431748-chr14:68439657..68441411,3	MCF-7	breast:
7	chr14:68430411..68433270-chr14:68602747..68607900,7	MCF-7	breast:
8	chr14:68429695..68431817-chr14:69281066..69283231,2	MCF-7	breast:
9	chr14:68431037..68432737-chr14:68710733..68713003,2	MCF-7	breast:
10	chr14:68429774..68432676-chr14:68633532..68635323,2	MCF-7	breast:
11	chr14:68410663..68413615-chr14:68431263..68433122,2	MCF-7	breast:
12	chr14:68430287..68432974-chr14:68711186..68712879,2	MCF-7	breast:
13	chr14:68431210..68433040-chr14:68605467..68607589,3	MCF-7	breast:
14	chr14:68429820..68432700-chr14:68441833..68443817,2	MCF-7	breast:
15	chr14:68428134..68434454-chr14:69257495..69262698,9	MCF-7	breast:
16	chr14:68430178..68431865-chr14:69259598..69261453,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000185650	Chromatin interaction

Extended variants
information (count: 220 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:219)

rs_ID	r²[population]
rs10129355	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10129612	0.95[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10130829	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10132022	0.95[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10132711	0.86[JPT][hapmap]
rs10132828	0.86[JPT][hapmap]
rs10133262	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10133652	0.82[JPT][hapmap]
rs10133883	0.93[EUR][1000 genomes]
rs10135316	0.82[JPT][hapmap]
rs10135925	0.82[JPT][hapmap]
rs10136129	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10136174	0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10136790	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10136868	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10137233	0.81[EUR][1000 genomes]
rs10137712	0.82[JPT][hapmap]
rs10139236	0.86[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap];0.81[EUR][1000 genomes]
rs10139386	0.86[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap];0.87[YRI][hapmap];0.81[EUR][1000 genomes]
rs10139548	0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10140097	1.00[CEU][hapmap];0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10140282	0.95[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10140420	0.81[EUR][1000 genomes]
rs10140493	0.81[EUR][1000 genomes]
rs10143219	0.82[JPT][hapmap]
rs10143455	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10143843	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10143895	0.82[JPT][hapmap]
rs10144128	0.82[JPT][hapmap]
rs10144995	0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10145884	0.82[JPT][hapmap]
rs10146719	0.82[JPT][hapmap]
rs10146766	0.82[JPT][hapmap]
rs10146831	0.88[JPT][hapmap]
rs10147569	0.82[JPT][hapmap]
rs10148527	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs10148893	0.82[JPT][hapmap]
rs10151115	0.85[EUR][1000 genomes]
rs10151123	0.82[JPT][hapmap]
rs10151317	0.82[JPT][hapmap]
rs10151387	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10450891	0.81[JPT][hapmap]
rs10467735	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10483805	0.80[CHB][hapmap]
rs1080956	0.85[EUR][1000 genomes]
rs1080957	0.85[CEU][hapmap];0.85[EUR][1000 genomes]
rs1080958	0.85[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap];0.85[EUR][1000 genomes]
rs10873210	0.85[CEU][hapmap];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11158710	0.82[JPT][hapmap]
rs11158715	0.95[CEU][hapmap];1.00[CHB][hapmap];0.83[JPT][hapmap];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11158716	0.86[CEU][hapmap];0.86[EUR][1000 genomes]
rs11158717	0.88[EUR][1000 genomes]
rs11158719	0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.81[EUR][1000 genomes]
rs1118397	0.82[JPT][hapmap]
rs11622135	0.86[CEU][hapmap];0.88[EUR][1000 genomes]
rs11622243	0.94[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11622787	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11623355	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.96[YRI][hapmap];0.89[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11623467	0.80[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap]
rs11623984	0.93[EUR][1000 genomes]
rs11624209	0.81[EUR][1000 genomes]
rs11624609	0.86[CEU][hapmap];0.87[EUR][1000 genomes]
rs11626280	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11628745	0.81[EUR][1000 genomes]
rs11844529	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11846344	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.94[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11847628	0.80[CHB][hapmap]
rs11848187	0.89[EUR][1000 genomes]
rs11848769	0.85[CEU][hapmap];0.88[EUR][1000 genomes]
rs11850191	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.94[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11850946	0.86[CEU][hapmap];0.89[EUR][1000 genomes]
rs11852180	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11852208	0.87[EUR][1000 genomes]
rs12100584	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12431697	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12432681	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12435554	0.86[CEU][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12437043	0.86[CHB][hapmap]
rs12437178	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12437276	0.88[EUR][1000 genomes]
rs13329056	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1548264	0.86[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs1548265	0.85[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap];0.88[YRI][hapmap];0.81[EUR][1000 genomes]
rs17104764	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17104774	0.82[JPT][hapmap]
rs17104776	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17104783	0.88[JPT][hapmap]
rs17104786	0.82[JPT][hapmap]
rs17104793	0.81[JPT][hapmap]
rs17104796	0.82[JPT][hapmap]
rs17104799	0.81[JPT][hapmap]
rs17104800	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17104823	0.82[JPT][hapmap]
rs17104824	0.82[JPT][hapmap]
rs17104827	0.82[JPT][hapmap]
rs17104829	0.82[JPT][hapmap]
rs17104889	0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.83[YRI][hapmap];0.81[EUR][1000 genomes]
rs17104908	0.80[CHB][hapmap];0.91[JPT][hapmap]
rs17192558	0.85[CEU][hapmap];0.89[EUR][1000 genomes]
rs17192586	0.85[CEU][hapmap];0.88[EUR][1000 genomes]
rs17783202	0.82[JPT][hapmap]
rs17783304	0.86[CEU][hapmap];0.89[EUR][1000 genomes]
rs1810639	0.81[EUR][1000 genomes]
rs181572	0.80[CHB][hapmap]
rs181575	0.80[CHB][hapmap]
rs1950766	0.82[JPT][hapmap]
rs1950767	0.98[ASN][1000 genomes]
rs1956346	0.80[CHB][hapmap]
rs1980654	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1980655	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.88[YRI][hapmap];0.80[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs2009191	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2038565	0.86[CEU][hapmap];0.84[EUR][1000 genomes]
rs2093358	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2180537	0.82[JPT][hapmap]
rs2208596	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2235962	0.80[CHB][hapmap]
rs2235963	0.80[CHB][hapmap]
rs2235965	0.80[CHB][hapmap]
rs2295108	0.80[CHB][hapmap]
rs2588832	0.80[CHB][hapmap]
rs2588833	0.80[CHB][hapmap]
rs28444723	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28470365	0.85[EUR][1000 genomes]
rs28474827	0.86[EUR][1000 genomes]
rs28474995	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs28488544	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28509330	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28649231	0.83[AMR][1000 genomes]
rs2877369	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28855496	0.98[ASN][1000 genomes]
rs34588410	0.88[EUR][1000 genomes]
rs34723132	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs372143	0.80[CHB][hapmap]
rs401021	0.80[CHB][hapmap]
rs408156	0.80[CHB][hapmap]
rs431649	0.80[CHB][hapmap]
rs437585	0.80[CHB][hapmap]
rs4436722	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4569184	0.80[CHB][hapmap]
rs4899231	0.85[EUR][1000 genomes]
rs4899232	0.84[EUR][1000 genomes]
rs4902533	0.98[ASN][1000 genomes]
rs4902535	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902536	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902538	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902539	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902544	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4902545	0.86[EUR][1000 genomes]
rs4902547	0.81[EUR][1000 genomes]
rs57990032	0.94[AFR][1000 genomes];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs58151429	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60201005	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60415085	0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs60471554	0.93[EUR][1000 genomes]
rs6573800	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6573801	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6573802	0.81[JPT][hapmap]
rs6573805	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6573814	1.00[CEU][hapmap];0.87[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs67566613	0.86[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs68139749	0.81[EUR][1000 genomes]
rs7142112	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7142210	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7142860	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7145044	0.89[CEU][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7145771	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7146354	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7147296	0.82[JPT][hapmap]
rs7149460	0.82[JPT][hapmap]
rs7150168	0.81[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap];0.88[YRI][hapmap];0.84[EUR][1000 genomes]
rs7151917	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7154014	0.84[EUR][1000 genomes]
rs7154646	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7154725	0.82[JPT][hapmap]
rs7155097	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7155840	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7155985	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7157185	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[YRI][hapmap];0.94[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7157550	0.82[JPT][hapmap]
rs7157720	0.82[JPT][hapmap]
rs7158544	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.85[YRI][hapmap];0.86[AFR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7160115	0.86[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7160196	0.80[CHB][hapmap]
rs7161069	0.92[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72725138	0.81[EUR][1000 genomes]
rs72725141	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72725149	0.89[EUR][1000 genomes]
rs72725151	0.88[EUR][1000 genomes]
rs72725153	0.88[EUR][1000 genomes]
rs72725156	0.84[EUR][1000 genomes]
rs72725157	0.88[EUR][1000 genomes]
rs72725159	0.84[EUR][1000 genomes]
rs72725165	0.87[EUR][1000 genomes]
rs72725168	0.88[EUR][1000 genomes]
rs72725170	0.88[EUR][1000 genomes]
rs72725172	0.84[EUR][1000 genomes]
rs72725174	0.81[EUR][1000 genomes]
rs72725190	0.81[EUR][1000 genomes]
rs8006089	0.80[CHB][hapmap]
rs8006175	0.82[JPT][hapmap]
rs8006437	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8006492	0.92[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs8008791	0.82[JPT][hapmap]
rs8011621	0.85[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs8013677	1.00[CEU][hapmap];0.96[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8014000	0.85[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.86[YRI][hapmap];0.81[EUR][1000 genomes]
rs8015128	0.86[CEU][hapmap];0.84[EUR][1000 genomes]
rs8015741	0.82[JPT][hapmap]
rs8016525	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8020512	0.82[JPT][hapmap]
rs8020795	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8021404	0.86[CEU][hapmap];0.84[EUR][1000 genomes]
rs8022206	0.84[CEU][hapmap];0.84[EUR][1000 genomes]
rs9323501	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9652362	0.82[JPT][hapmap]
rs9652363	0.82[JPT][hapmap]
rs9652364	0.82[JPT][hapmap]
rs9672142	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9796374	0.82[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869154	chr14:68366754-69041768	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:48 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68408600-68435400	Weak transcription	Thymus	Thymus
2	chr14:68409400-68434200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr14:68427400-68433600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr14:68428200-68432200	Enhancers	Primary neutrophils fromperipheralblood	blood
5	chr14:68428600-68433400	Enhancers	Colon Smooth Muscle	Colon
6	chr14:68428600-68435000	Enhancers	Fetal Intestine Large	intestine
7	chr14:68428800-68433000	Enhancers	Rectal Smooth Muscle	rectum
8	chr14:68429200-68432400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr14:68429200-68433800	Weak transcription	Primary T cells from cord blood	blood
10	chr14:68429400-68433600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr14:68429400-68445200	Weak transcription	Ovary	ovary
12	chr14:68429600-68432400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
13	chr14:68429600-68444400	Weak transcription	Primary hematopoietic stem cells	blood
14	chr14:68430000-68433800	Enhancers	Primary monocytes fromperipheralblood	blood
15	chr14:68430200-68433600	Enhancers	Fetal Intestine Small	intestine
16	chr14:68430400-68431400	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr14:68430400-68431400	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr14:68430400-68431600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr14:68430400-68431600	Active TSS	Adipose Nuclei	Adipose
20	chr14:68430400-68431800	Flanking Active TSS	NHEK	skin
21	chr14:68430400-68434400	Enhancers	Stomach Mucosa	stomach
22	chr14:68430600-68431400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr14:68430600-68431400	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr14:68430600-68431400	Active TSS	Rectal Mucosa Donor 29	rectum
25	chr14:68430600-68431800	Enhancers	Liver	Liver
26	chr14:68430600-68433000	Enhancers	Breast Myoepithelial Primary Cells	Breast
27	chr14:68430600-68434600	Enhancers	Duodenum Mucosa	Duodenum
28	chr14:68430800-68431400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr14:68430800-68432600	Enhancers	Placenta Amnion	Placenta Amnion
30	chr14:68430800-68433000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
31	chr14:68430800-68433400	Enhancers	Fetal Stomach	stomach
32	chr14:68431000-68431400	Enhancers	Muscle Satellite Cultured Cells	--
33	chr14:68431000-68431400	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
34	chr14:68431000-68431400	Flanking Active TSS	Hela-S3	cervix
35	chr14:68431000-68431600	Enhancers	HepG2	liver
36	chr14:68431000-68431800	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
37	chr14:68431000-68432000	Enhancers	Placenta	Placenta
38	chr14:68431000-68432400	Enhancers	Small Intestine	intestine
39	chr14:68431200-68431400	Enhancers	A549	lung
40	chr14:68431200-68431400	Active TSS	HMEC	breast
41	chr14:68431200-68431400	Flanking Active TSS	NHDF-Ad	bronchial
42	chr14:68431200-68431400	Flanking Active TSS	Osteobl	bone
43	chr14:68431200-68431600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr14:68431200-68431600	Enhancers	Primary B cells from cord blood	blood
45	chr14:68431200-68431600	Flanking Active TSS	NHLF	lung
46	chr14:68431200-68432000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr14:68431200-68433600	Enhancers	Fetal Lung	lung
48	chr14:68431200-68434600	Enhancers	Rectal Mucosa Donor 31	rectum

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