Variant report

Variant	rs6573802
Chromosome Location	chr14:68413524-68413525
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:68405383..68414524-chr14:68603693..68608960,22	MCF-7	breast:
2	chr14:68412401..68415259-chr14:68423760..68426375,2	MCF-7	breast:
3	chr14:68403008..68415592-chr14:69254956..69264690,41	MCF-7	breast:
4	chr14:68406635..68408147-chr14:68411464..68413637,2	MCF-7	breast:
5	chr14:68407844..68414968-chr14:68428702..68432615,7	MCF-7	breast:
6	chr14:68404009..68415107-chr14:68656381..68664155,17	MCF-7	breast:
7	chr14:68410663..68413615-chr14:68431263..68433122,2	MCF-7	breast:
8	chr14:68403242..68413680-chr14:69255078..69264293,34	MCF-7	breast:
9	chr14:68407127..68413734-chr14:68709753..68718255,16	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000185650	Chromatin interaction

Extended variants
information (count: 216 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:215)

rs_ID	r²[population]
rs10130605	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10130837	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10130997	0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10131828	0.85[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10132711	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10132828	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10133262	0.81[JPT][hapmap]
rs10133485	1.00[CEU][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10133652	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10134124	0.89[JPT][hapmap]
rs10134320	0.86[JPT][hapmap]
rs10134664	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes]
rs10134988	0.85[EUR][1000 genomes]
rs10135046	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes]
rs10135256	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.85[YRI][hapmap];0.80[AFR][1000 genomes]
rs10135316	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10135925	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10136790	0.81[JPT][hapmap]
rs10137457	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10137712	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10138719	0.94[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs10140465	0.84[AFR][1000 genomes]
rs10141018	0.88[JPT][hapmap]
rs10142285	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10142687	0.92[EUR][1000 genomes]
rs10142929	0.92[EUR][1000 genomes]
rs10143219	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10143843	0.81[JPT][hapmap]
rs10143895	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10144128	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10144224	1.00[CHB][hapmap];0.89[JPT][hapmap];0.85[YRI][hapmap];0.80[AFR][1000 genomes]
rs10145197	0.89[JPT][hapmap]
rs10145884	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10146113	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10146189	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10146719	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs10146766	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10146831	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10147311	0.86[JPT][hapmap]
rs10147569	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs10147820	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10148527	0.81[JPT][hapmap]
rs10148893	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10150330	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10150584	0.85[CHB][hapmap];0.89[JPT][hapmap]
rs10150789	0.86[AFR][1000 genomes]
rs10151123	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10151317	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10450891	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10467819	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1073024	0.84[AFR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1073025	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1073026	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11158710	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11158720	0.85[CHB][hapmap];0.89[JPT][hapmap]
rs11158721	0.89[JPT][hapmap]
rs1118397	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11625742	1.00[CEU][hapmap]
rs11844529	0.81[JPT][hapmap]
rs11844842	0.89[JPT][hapmap]
rs11846344	0.81[JPT][hapmap]
rs11847339	0.89[JPT][hapmap]
rs11850191	0.81[JPT][hapmap]
rs11851991	0.82[CHB][hapmap];0.89[JPT][hapmap]
rs11852180	0.81[JPT][hapmap]
rs12431697	0.81[JPT][hapmap]
rs17104681	1.00[CEU][hapmap]
rs17104689	1.00[CEU][hapmap]
rs17104700	1.00[CEU][hapmap]
rs17104758	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17104764	0.81[JPT][hapmap]
rs17104774	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17104776	0.81[JPT][hapmap]
rs17104783	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17104786	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17104793	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17104796	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[YRI][hapmap];0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17104799	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17104800	0.81[JPT][hapmap]
rs17104823	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17104824	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17104827	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17104829	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17104862	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs17104863	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs17104880	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs17104900	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes]
rs17104917	0.85[CHB][hapmap];0.89[JPT][hapmap]
rs17104947	0.89[JPT][hapmap]
rs17104953	0.84[JPT][hapmap]
rs17104992	0.89[JPT][hapmap]
rs17105001	0.85[CHB][hapmap];0.89[JPT][hapmap]
rs17783202	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1950766	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs1951411	0.89[JPT][hapmap]
rs1955469	1.00[CEU][hapmap]
rs2057361	0.85[CHB][hapmap];0.88[JPT][hapmap]
rs2180537	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28396172	0.85[EUR][1000 genomes]
rs28405326	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs28434770	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28444090	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28448732	0.82[AFR][1000 genomes]
rs28473357	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs28516665	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28701947	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28751570	1.00[ASN][1000 genomes]
rs28751961	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28757308	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2877369	0.81[JPT][hapmap]
rs28816808	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28833913	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28835585	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28847917	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28869007	0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs28896907	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34700596	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35608268	0.84[EUR][1000 genomes]
rs3742882	1.00[CEU][hapmap]
rs3742883	1.00[CEU][hapmap]
rs3742885	1.00[CEU][hapmap];0.85[CHB][hapmap]
rs4272963	0.85[YRI][hapmap]
rs4436722	0.81[JPT][hapmap]
rs4899226	0.92[EUR][1000 genomes]
rs4899228	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4899229	1.00[CEU][hapmap];0.95[YRI][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4902523	1.00[CEU][hapmap];0.85[CHB][hapmap];0.92[EUR][1000 genomes]
rs4902525	0.82[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs4902529	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4902530	1.00[CEU][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4902531	1.00[CEU][hapmap];0.85[YRI][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4902532	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4902534	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4902535	0.81[JPT][hapmap]
rs4902536	0.81[JPT][hapmap]
rs4902537	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902538	0.81[JPT][hapmap]
rs4902540	0.81[JPT][hapmap]
rs4902541	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902543	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902548	0.89[JPT][hapmap]
rs4902550	0.89[JPT][hapmap]
rs60014063	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6573806	0.94[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs6573815	0.89[JPT][hapmap]
rs6573816	0.89[JPT][hapmap]
rs7140987	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7141203	1.00[CEU][hapmap]
rs7142112	0.81[JPT][hapmap]
rs7142210	0.81[JPT][hapmap]
rs7143483	0.85[YRI][hapmap]
rs7143521	1.00[CEU][hapmap]
rs7145385	0.83[YRI][hapmap]
rs7146354	0.81[JPT][hapmap]
rs7147296	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7147522	0.89[JPT][hapmap]
rs7147935	0.89[JPT][hapmap]
rs7148799	0.89[JPT][hapmap]
rs7149122	0.84[EUR][1000 genomes]
rs7149343	0.89[JPT][hapmap]
rs7149360	0.84[EUR][1000 genomes]
rs7149460	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7149796	1.00[CEU][hapmap];0.85[CHB][hapmap];0.81[YRI][hapmap];0.92[EUR][1000 genomes]
rs7150467	0.84[EUR][1000 genomes]
rs7150716	0.88[JPT][hapmap]
rs7150860	1.00[CEU][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7151035	0.92[EUR][1000 genomes]
rs7152445	0.84[EUR][1000 genomes]
rs7152727	0.84[EUR][1000 genomes]
rs7153470	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7154228	0.89[JPT][hapmap]
rs7154645	0.82[CHB][hapmap];0.86[JPT][hapmap]
rs7154646	0.81[JPT][hapmap]
rs7154725	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7155097	0.81[JPT][hapmap]
rs7155840	0.81[JPT][hapmap]
rs7156492	1.00[CEU][hapmap]
rs7157185	0.81[JPT][hapmap]
rs7157550	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7157699	0.83[YRI][hapmap]
rs7157720	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73282485	1.00[ASN][1000 genomes]
rs73284210	0.98[ASN][1000 genomes]
rs7359083	0.85[CHB][hapmap];0.89[JPT][hapmap]
rs8003181	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8006175	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8007347	0.85[CHB][hapmap];0.89[JPT][hapmap]
rs8007989	1.00[CEU][hapmap];0.85[CHB][hapmap];0.81[YRI][hapmap];0.92[EUR][1000 genomes]
rs8008791	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8009762	0.85[YRI][hapmap]
rs8010136	0.83[YRI][hapmap]
rs8012493	0.89[JPT][hapmap]
rs8012665	1.00[CEU][hapmap]
rs8014844	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8015520	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8015595	1.00[CEU][hapmap];0.85[CHB][hapmap];0.81[YRI][hapmap];0.92[EUR][1000 genomes]
rs8015741	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8016246	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8016525	0.81[JPT][hapmap]
rs8016563	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8017718	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8017930	1.00[CEU][hapmap];0.95[YRI][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8018029	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.86[YRI][hapmap];0.83[AFR][1000 genomes]
rs8018883	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8019420	1.00[EUR][1000 genomes]
rs8020512	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9323501	0.81[JPT][hapmap]
rs932475	1.00[CEU][hapmap]
rs957930	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs9652362	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9652363	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9652364	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9672111	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs9788517	1.00[CEU][hapmap]
rs9796374	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869154	chr14:68366754-69041768	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68408600-68420200	Weak transcription	Ovary	ovary
2	chr14:68408600-68430200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr14:68408600-68435400	Weak transcription	Thymus	Thymus
4	chr14:68409400-68415800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
5	chr14:68409400-68416800	Weak transcription	Aorta	Aorta
6	chr14:68409400-68434200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr14:68409600-68430600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr14:68412000-68414400	Weak transcription	Colon Smooth Muscle	Colon
9	chr14:68412000-68421600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr14:68412000-68423800	Weak transcription	Stomach Mucosa	stomach
11	chr14:68412000-68431000	Weak transcription	Small Intestine	intestine
12	chr14:68412200-68416200	Weak transcription	Fetal Lung	lung
13	chr14:68412800-68413800	Weak transcription	Duodenum Mucosa	Duodenum
14	chr14:68413200-68413800	Weak transcription	A549	lung

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Variant report

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