Variant report

Variant	rs11623355
Chromosome Location	chr14:68510317-68510318
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:68508469..68511778-chr14:68605587..68608728,3	MCF-7	breast:
2	chr14:68508416..68510926-chr20:45984921..45987088,2	MCF-7	breast:
3	chr14:68405731..68407389-chr14:68509110..68511642,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000101040	Chromatin interaction

Extended variants
information (count: 219 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:218)

rs_ID	r²[population]
rs10129355	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10129612	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10130829	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10132022	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];0.85[MKK][hapmap];0.94[TSI][hapmap];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10133262	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10133652	0.93[CHD][hapmap]
rs10133883	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10134124	0.81[JPT][hapmap]
rs10134664	0.81[JPT][hapmap]
rs10135046	0.81[JPT][hapmap]
rs10135256	0.81[JPT][hapmap]
rs10135925	0.93[CHD][hapmap]
rs10136129	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10136174	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10136790	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.93[YRI][hapmap];0.87[AFR][1000 genomes];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10136868	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10137233	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10139236	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10139386	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10139548	0.89[EUR][1000 genomes]
rs10140097	1.00[CEU][hapmap];0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10140282	0.89[AFR][1000 genomes];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10140420	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10140493	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10143455	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10143843	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10144128	0.93[CHD][hapmap]
rs10144224	0.81[JPT][hapmap]
rs10144995	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10145197	0.81[JPT][hapmap]
rs10147311	0.88[JPT][hapmap]
rs10148527	1.00[CHB][hapmap];0.91[JPT][hapmap]
rs1015023	0.84[GIH][hapmap]
rs10150584	0.81[JPT][hapmap]
rs10151115	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10151387	0.88[EUR][1000 genomes]
rs10467735	0.85[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs1080956	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1080957	0.85[CEU][hapmap];0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1080958	0.84[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10873210	0.84[CEU][hapmap]
rs11158710	0.93[CHD][hapmap]
rs11158715	0.95[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11158716	0.85[CEU][hapmap];0.84[EUR][1000 genomes]
rs11158717	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11158719	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11158720	0.93[CHD][hapmap];0.81[JPT][hapmap]
rs11158721	0.93[CHD][hapmap];0.81[JPT][hapmap]
rs11622135	0.85[CEU][hapmap];0.86[EUR][1000 genomes]
rs11622243	0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11622787	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11623467	0.80[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.88[TSI][hapmap];0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11623984	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11624166	0.89[GIH][hapmap]
rs11624209	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11624609	0.85[CEU][hapmap];0.85[EUR][1000 genomes]
rs11626280	0.88[AFR][1000 genomes];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11626594	0.84[GIH][hapmap]
rs11628745	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11629073	0.80[EUR][1000 genomes]
rs11844529	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.96[YRI][hapmap];0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11844842	0.81[JPT][hapmap]
rs11846344	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.87[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11847339	0.81[JPT][hapmap]
rs11848187	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11848769	0.85[CEU][hapmap];0.86[EUR][1000 genomes]
rs11850191	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.87[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11850946	0.85[CEU][hapmap];0.84[EUR][1000 genomes]
rs11851991	0.81[JPT][hapmap]
rs11852180	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.96[YRI][hapmap];0.91[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11852208	0.85[EUR][1000 genomes]
rs12100584	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.96[YRI][hapmap];0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12431697	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.92[MEX][hapmap];0.94[TSI][hapmap];0.86[EUR][1000 genomes]
rs12432681	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12435554	0.85[CEU][hapmap];0.84[EUR][1000 genomes]
rs12437043	0.86[CHB][hapmap];0.89[JPT][hapmap];0.80[ASN][1000 genomes]
rs12437178	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12437276	0.86[EUR][1000 genomes]
rs13329056	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1548264	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1548265	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17104764	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.96[YRI][hapmap];0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17104776	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.96[YRI][hapmap];0.83[EUR][1000 genomes]
rs17104786	0.93[CHD][hapmap]
rs17104796	0.93[CHD][hapmap]
rs17104800	0.95[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.87[EUR][1000 genomes]
rs17104823	0.93[CHD][hapmap]
rs17104862	0.81[JPT][hapmap]
rs17104863	0.93[CHD][hapmap];0.81[JPT][hapmap]
rs17104880	0.81[JPT][hapmap]
rs17104889	0.89[ASW][hapmap];0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];0.91[MEX][hapmap];0.85[MKK][hapmap];0.91[TSI][hapmap];0.90[YRI][hapmap];0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17104900	0.81[JPT][hapmap]
rs17104908	0.80[CHB][hapmap];0.93[CHD][hapmap];1.00[JPT][hapmap]
rs17104917	0.93[CHD][hapmap];0.81[JPT][hapmap]
rs17104947	0.81[JPT][hapmap]
rs17104992	0.81[JPT][hapmap]
rs17105001	0.81[JPT][hapmap]
rs17192558	0.85[CEU][hapmap];0.85[TSI][hapmap];0.84[EUR][1000 genomes]
rs17192586	0.85[CEU][hapmap];0.85[TSI][hapmap];0.83[EUR][1000 genomes]
rs17783202	0.93[CHD][hapmap]
rs17783304	0.85[CEU][hapmap];0.84[EUR][1000 genomes]
rs1810639	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1950769	0.84[GIH][hapmap]
rs1951411	0.81[JPT][hapmap]
rs1980654	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1980655	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2009191	0.87[EUR][1000 genomes]
rs2038565	0.85[CEU][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2093358	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2180537	0.93[CHD][hapmap]
rs2208596	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2588832	0.80[CHB][hapmap];1.00[CHD][hapmap];0.83[JPT][hapmap]
rs2588833	0.80[CHB][hapmap];1.00[CHD][hapmap];0.83[JPT][hapmap]
rs2767366	1.00[CHD][hapmap];0.83[JPT][hapmap]
rs28444723	0.88[EUR][1000 genomes]
rs28470365	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28474827	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs28474995	0.89[EUR][1000 genomes]
rs28488544	0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28509330	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2877369	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.96[YRI][hapmap];0.87[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs33949561	0.80[AMR][1000 genomes];0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34588410	0.86[EUR][1000 genomes]
rs34723132	0.84[EUR][1000 genomes]
rs372143	0.80[CHB][hapmap];1.00[CHD][hapmap];0.83[JPT][hapmap]
rs373918	0.83[JPT][hapmap]
rs401021	0.80[CHB][hapmap];0.83[JPT][hapmap]
rs408156	0.80[CHB][hapmap];0.83[JPT][hapmap]
rs411547	0.82[JPT][hapmap]
rs431649	0.80[CHB][hapmap];1.00[CHD][hapmap];0.83[JPT][hapmap]
rs437585	0.80[CHB][hapmap];0.83[JPT][hapmap]
rs4436722	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.92[EUR][1000 genomes]
rs4899231	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4899232	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4902535	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.96[YRI][hapmap];0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4902536	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4902538	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.90[AFR][1000 genomes];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4902539	0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4902540	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.96[YRI][hapmap];0.89[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4902544	0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4902545	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4902547	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4902548	0.81[JPT][hapmap]
rs4902550	0.81[JPT][hapmap]
rs57069083	0.81[EUR][1000 genomes]
rs57990032	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs58151429	0.87[EUR][1000 genomes]
rs60201005	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs60415085	0.82[EUR][1000 genomes]
rs60471554	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6573800	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6573801	0.90[AFR][1000 genomes];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6573805	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6573814	1.00[CEU][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6573815	0.81[JPT][hapmap]
rs6573816	0.81[JPT][hapmap]
rs67566613	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs68139749	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7142112	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.93[YRI][hapmap];0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7142210	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.93[YRI][hapmap];0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7142860	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7145044	0.88[CEU][hapmap];0.84[EUR][1000 genomes]
rs7145771	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7146354	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.92[YRI][hapmap];0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7147296	0.93[CHD][hapmap]
rs7147522	0.93[CHD][hapmap];0.81[JPT][hapmap]
rs7147935	0.93[CHD][hapmap];0.81[JPT][hapmap]
rs7148799	0.93[CHD][hapmap];0.81[JPT][hapmap]
rs7149343	0.93[CHD][hapmap];0.81[JPT][hapmap]
rs7150168	0.80[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7151091	0.89[GIH][hapmap]
rs7151917	0.84[EUR][1000 genomes]
rs7154014	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7154228	0.81[JPT][hapmap]
rs7154646	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7155097	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7155840	0.95[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.87[EUR][1000 genomes]
rs7155985	0.84[EUR][1000 genomes]
rs7156822	0.80[ASN][1000 genomes]
rs7157152	0.82[JPT][hapmap]
rs7157185	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.93[YRI][hapmap];0.87[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7158544	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7160115	0.85[CEU][hapmap];0.89[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7161069	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725141	0.84[EUR][1000 genomes]
rs72725149	0.84[EUR][1000 genomes]
rs72725151	0.86[EUR][1000 genomes]
rs72725153	0.86[EUR][1000 genomes]
rs72725156	0.82[EUR][1000 genomes]
rs72725157	0.86[EUR][1000 genomes]
rs72725159	0.82[EUR][1000 genomes]
rs72725165	0.85[EUR][1000 genomes]
rs72725168	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72725170	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72725172	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72725173	0.80[EUR][1000 genomes]
rs72725174	0.85[EUR][1000 genomes]
rs72725190	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7359083	0.93[CHD][hapmap];0.81[JPT][hapmap]
rs8006437	0.81[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs8006492	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8007347	0.93[CHD][hapmap];0.81[JPT][hapmap]
rs8008791	0.93[CHD][hapmap]
rs8011621	0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8012493	0.81[JPT][hapmap]
rs8013677	1.00[CEU][hapmap];0.91[YRI][hapmap];0.87[AFR][1000 genomes];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs8014000	0.83[ASW][hapmap];0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.82[LWK][hapmap];0.91[MEX][hapmap];0.84[MKK][hapmap];0.91[TSI][hapmap];0.86[YRI][hapmap];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8015128	0.85[CEU][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs8016525	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs8018029	0.81[JPT][hapmap]
rs8020795	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs8021404	0.85[CEU][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs8022206	0.83[CEU][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9323501	0.95[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.87[EUR][1000 genomes]
rs9323502	0.80[AMR][1000 genomes];0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs957930	0.81[JPT][hapmap]
rs961700	0.89[GIH][hapmap]
rs9672142	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869154	chr14:68366754-69041768	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:48 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68499800-68512600	Weak transcription	Adipose Nuclei	Adipose
2	chr14:68499800-68516200	Weak transcription	Primary hematopoietic stem cells	blood
3	chr14:68503600-68519800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr14:68506400-68511000	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr14:68506400-68511200	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr14:68506600-68510400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
7	chr14:68506600-68511200	Enhancers	Colon Smooth Muscle	Colon
8	chr14:68506600-68512000	Weak transcription	HUVEC	blood vessel
9	chr14:68506800-68511200	Enhancers	HUES64 Cell Line	embryonic stem cell
10	chr14:68507200-68511200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr14:68507400-68511000	Enhancers	Rectal Smooth Muscle	rectum
12	chr14:68507600-68510600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr14:68507600-68510800	Enhancers	H1 Cell Line	embryonic stem cell
14	chr14:68507600-68511600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr14:68507800-68511200	Enhancers	HUES48 Cell Line	embryonic stem cell
16	chr14:68507800-68511200	Enhancers	HUES6 Cell Line	embryonic stem cell
17	chr14:68507800-68511200	Enhancers	iPS-20b Cell Line	embryonic stem cell
18	chr14:68507800-68511200	Enhancers	Breast Myoepithelial Primary Cells	Breast
19	chr14:68507800-68511400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr14:68508000-68510400	Weak transcription	H9 Cell Line	embryonic stem cell
21	chr14:68508000-68511200	Enhancers	iPS-18 Cell Line	embryonic stem cell
22	chr14:68508000-68511600	Enhancers	Fetal Lung	lung
23	chr14:68508000-68511600	Enhancers	Fetal Stomach	stomach
24	chr14:68508000-68514000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
25	chr14:68508400-68511200	Enhancers	NHEK	skin
26	chr14:68508400-68511400	Enhancers	Fetal Kidney	kidney
27	chr14:68508600-68511000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr14:68508600-68511400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
29	chr14:68508800-68511200	Enhancers	Cortex derived primary cultured neurospheres	brain
30	chr14:68508800-68512600	Weak transcription	Ovary	ovary
31	chr14:68508800-68513000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
32	chr14:68509000-68510800	Enhancers	A549	lung
33	chr14:68509000-68517200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
34	chr14:68509200-68511200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
35	chr14:68509400-68510400	Weak transcription	Brain Substantia Nigra	brain
36	chr14:68509400-68511000	Enhancers	Skeletal Muscle Female	skeletal muscle
37	chr14:68509600-68510600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
38	chr14:68509800-68510400	Enhancers	Rectal Mucosa Donor 29	rectum
39	chr14:68509800-68510400	Weak transcription	Rectal Mucosa Donor 31	rectum
40	chr14:68509800-68510600	Weak transcription	Stomach Mucosa	stomach
41	chr14:68509800-68511000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr14:68510000-68510400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
43	chr14:68510000-68510400	Weak transcription	Duodenum Smooth Muscle	Duodenum
44	chr14:68510000-68510400	Weak transcription	Stomach Smooth Muscle	stomach
45	chr14:68510000-68511000	Weak transcription	HMEC	breast
46	chr14:68510000-68516200	Weak transcription	Fetal Intestine Small	intestine
47	chr14:68510200-68510600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
48	chr14:68510200-68510800	Weak transcription	Psoas Muscle	Psoas

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