The 2.0 version of rSNPBase

Variant report

Variant rs17075762
Chromosome Location chr3:43569948-43569949
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:43539200-43575000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
2 chr3:43540000-43582000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr3:43540200-43602200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr3:43542800-43588800 Weak transcription Left Ventricle heart
5 chr3:43544000-43617600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr3:43547600-43595800 Weak transcription Fetal Stomach stomach
7 chr3:43551000-43577800 Weak transcription H1 Cell Line embryonic stem cell
8 chr3:43553000-43601600 Weak transcription Colon Smooth Muscle Colon
9 chr3:43553600-43595800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr3:43554000-43579000 Weak transcription Fetal Brain Male brain
11 chr3:43554800-43573400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr3:43554800-43589400 Weak transcription HSMMtube muscle
13 chr3:43556200-43624800 Weak transcription Rectal Smooth Muscle rectum
14 chr3:43557000-43577200 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr3:43558600-43625600 Weak transcription Lung lung
16 chr3:43560800-43618000 Weak transcription Brain Hippocampus Middle brain
17 chr3:43561200-43601200 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr3:43561400-43600400 Weak transcription Stomach Smooth Muscle stomach
19 chr3:43561600-43570400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr3:43561600-43588800 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr3:43561600-43589000 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr3:43561600-43590600 Weak transcription Ovary ovary
23 chr3:43561600-43601000 Weak transcription Pancreas Pancrea
24 chr3:43561800-43570200 Weak transcription HUES64 Cell Line embryonic stem cell
25 chr3:43561800-43590600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr3:43561800-43602000 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr3:43562000-43575800 Weak transcription iPS-18 Cell Line embryonic stem cell
28 chr3:43562000-43589200 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr3:43563200-43580000 Weak transcription HSMM muscle
30 chr3:43564400-43570200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr3:43565400-43573200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr3:43565400-43580000 Weak transcription Aorta Aorta
33 chr3:43565400-43583600 Weak transcription Fetal Intestine Small intestine
34 chr3:43565600-43572000 Weak transcription Fetal Kidney kidney
35 chr3:43565600-43573400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr3:43565600-43573400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr3:43565600-43573400 Weak transcription HUVEC blood vessel
38 chr3:43565600-43576000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr3:43566600-43577600 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr3:43567000-43570800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr3:43567000-43583400 Weak transcription K562 blood
42 chr3:43567200-43583200 Weak transcription Duodenum Mucosa Duodenum
43 chr3:43567400-43578600 Weak transcription Primary monocytes fromperipheralblood blood
44 chr3:43567800-43573400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr3:43568000-43570200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr3:43568200-43570600 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr3:43568200-43573400 Weak transcription Osteobl bone
48 chr3:43568200-43580800 Weak transcription Primary neutrophils fromperipheralblood blood
49 chr3:43568400-43573400 Weak transcription Muscle Satellite Cultured Cells --
50 chr3:43569400-43571000 ZNF genes & repeats Adipose Nuclei Adipose

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Last update: Aug 31, 2015