The 2.0 version of rSNPBase

Variant report

Variant rs17075784
Chromosome Location chr3:43575826-43575827
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:43540000-43582000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
2 chr3:43540200-43602200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr3:43542800-43588800 Weak transcription Left Ventricle heart
4 chr3:43544000-43617600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr3:43547600-43595800 Weak transcription Fetal Stomach stomach
6 chr3:43551000-43577800 Weak transcription H1 Cell Line embryonic stem cell
7 chr3:43553000-43601600 Weak transcription Colon Smooth Muscle Colon
8 chr3:43553600-43595800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr3:43554000-43579000 Weak transcription Fetal Brain Male brain
10 chr3:43554800-43589400 Weak transcription HSMMtube muscle
11 chr3:43556200-43624800 Weak transcription Rectal Smooth Muscle rectum
12 chr3:43557000-43577200 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr3:43558600-43625600 Weak transcription Lung lung
14 chr3:43560800-43618000 Weak transcription Brain Hippocampus Middle brain
15 chr3:43561200-43601200 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr3:43561400-43600400 Weak transcription Stomach Smooth Muscle stomach
17 chr3:43561600-43588800 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr3:43561600-43589000 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr3:43561600-43590600 Weak transcription Ovary ovary
20 chr3:43561600-43601000 Weak transcription Pancreas Pancrea
21 chr3:43561800-43590600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr3:43561800-43602000 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr3:43562000-43589200 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr3:43563200-43580000 Weak transcription HSMM muscle
25 chr3:43565400-43580000 Weak transcription Aorta Aorta
26 chr3:43565400-43583600 Weak transcription Fetal Intestine Small intestine
27 chr3:43565600-43576000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr3:43566600-43577600 Weak transcription ES-I3 Cell Line embryonic stem cell
29 chr3:43567000-43583400 Weak transcription K562 blood
30 chr3:43567200-43583200 Weak transcription Duodenum Mucosa Duodenum
31 chr3:43567400-43578600 Weak transcription Primary monocytes fromperipheralblood blood
32 chr3:43568200-43580800 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr3:43569600-43587800 Weak transcription Primary T cells from cord blood blood
34 chr3:43570200-43580000 Weak transcription Monocytes-CD14+_RO01746 blood
35 chr3:43570800-43576000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr3:43570800-43577200 Weak transcription HUES64 Cell Line embryonic stem cell
37 chr3:43571000-43577400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr3:43571000-43578800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
39 chr3:43571000-43582000 Weak transcription Adipose Nuclei Adipose
40 chr3:43571000-43588000 Weak transcription Primary hematopoietic stem cells blood
41 chr3:43571000-43594600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr3:43571000-43613600 Weak transcription Gastric stomach
43 chr3:43571600-43577200 Weak transcription HUES6 Cell Line embryonic stem cell
44 chr3:43573600-43576400 Enhancers Hela-S3 cervix
45 chr3:43573800-43577000 Weak transcription HUVEC blood vessel
46 chr3:43573800-43582000 Weak transcription NHDF-Ad bronchial
47 chr3:43573800-43596400 Weak transcription HMEC breast
48 chr3:43573800-43601400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr3:43573800-43617800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr3:43574000-43576000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015