The 2.0 version of rSNPBase

Variant report

Variant rs17075709
Chromosome Location chr3:43446496-43446497
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:43421400-43454800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr3:43428800-43447600 Weak transcription H9 Cell Line embryonic stem cell
3 chr3:43430000-43449400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr3:43430000-43460200 Weak transcription Aorta Aorta
5 chr3:43431800-43447000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr3:43432000-43446600 Weak transcription HSMM muscle
7 chr3:43432000-43450800 Weak transcription Esophagus oesophagus
8 chr3:43432000-43453600 Weak transcription Gastric stomach
9 chr3:43432000-43460200 Weak transcription Rectal Smooth Muscle rectum
10 chr3:43432000-43477800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr3:43432200-43447000 Weak transcription Small Intestine intestine
12 chr3:43432200-43448000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr3:43432200-43453800 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr3:43432400-43447600 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr3:43432400-43453800 Weak transcription Primary T cells from cord blood blood
16 chr3:43433200-43447600 Weak transcription Lung lung
17 chr3:43433400-43448600 Weak transcription NHEK skin
18 chr3:43433400-43458800 Weak transcription Pancreas Pancrea
19 chr3:43435800-43448800 Weak transcription Primary neutrophils fromperipheralblood blood
20 chr3:43436200-43446800 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr3:43436400-43450600 Weak transcription Placenta Placenta
22 chr3:43436400-43452200 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr3:43436400-43475800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr3:43440800-43464400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr3:43441000-43447400 Weak transcription HSMMtube muscle
26 chr3:43441000-43453800 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr3:43442000-43447600 Weak transcription Right Atrium heart
28 chr3:43442000-43450800 Weak transcription Ovary ovary
29 chr3:43442000-43455200 Weak transcription Right Ventricle heart
30 chr3:43442200-43447600 Weak transcription Stomach Smooth Muscle stomach
31 chr3:43442200-43455200 Weak transcription Fetal Stomach stomach
32 chr3:43442400-43447000 Weak transcription Left Ventricle heart
33 chr3:43442400-43447400 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr3:43442400-43460200 Weak transcription Fetal Muscle Leg muscle
35 chr3:43442600-43447600 Weak transcription HUVEC blood vessel
36 chr3:43442600-43460200 Weak transcription Adipose Nuclei Adipose
37 chr3:43442800-43448600 Weak transcription Fetal Intestine Small intestine
38 chr3:43443000-43495600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr3:43443400-43465800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr3:43443600-43447400 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr3:43444200-43447600 Weak transcription Fetal Brain Female brain
42 chr3:43444600-43446600 Weak transcription Fetal Lung lung
43 chr3:43445000-43447600 Weak transcription Duodenum Mucosa Duodenum
44 chr3:43445800-43447400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr3:43445800-43447400 Weak transcription Psoas Muscle Psoas
46 chr3:43446000-43447600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr3:43446200-43447000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
48 chr3:43446200-43447400 Weak transcription K562 blood
49 chr3:43446200-43447600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015