Variant report

Variant	rs73831256
Chromosome Location	chr3:43377040-43377041
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 133 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:133)

rs_ID	r²[population]
rs17075422	1.00[AMR][1000 genomes]
rs17075424	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17075519	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17075525	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17075540	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17075545	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17075555	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17075561	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17075563	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17075564	0.91[AFR][1000 genomes]
rs17075568	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17075570	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17075574	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17075581	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17075587	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17075614	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17075617	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17075623	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17075624	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17075709	0.85[AFR][1000 genomes]
rs17254716	1.00[AMR][1000 genomes]
rs17320381	1.00[AMR][1000 genomes]
rs17405728	1.00[AMR][1000 genomes]
rs17406148	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17406718	0.91[AFR][1000 genomes]
rs17472888	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2036617	0.94[AFR][1000 genomes]
rs2086652	0.85[AFR][1000 genomes]
rs34343482	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs34730190	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs41321344	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4368477	0.85[AFR][1000 genomes]
rs55694436	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55727302	1.00[AMR][1000 genomes]
rs55730605	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55760455	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55765643	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55786717	0.91[AFR][1000 genomes]
rs55804512	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55837468	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55864645	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55887904	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55908419	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55915337	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55951861	1.00[AMR][1000 genomes]
rs55957435	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56100043	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56209592	0.85[AFR][1000 genomes]
rs56225070	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56282728	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56285372	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56286131	1.00[AMR][1000 genomes]
rs56388016	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56395291	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56659864	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56741341	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56849726	0.85[AFR][1000 genomes]
rs57019763	1.00[AMR][1000 genomes]
rs57020473	1.00[AMR][1000 genomes]
rs57376786	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58066802	0.85[AFR][1000 genomes]
rs58158782	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58209397	1.00[AMR][1000 genomes]
rs58216554	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58508138	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58636339	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58866653	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59113361	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59121457	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59276993	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59433561	0.85[AFR][1000 genomes]
rs59495244	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59545985	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59706458	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59872395	1.00[AMR][1000 genomes]
rs59930267	1.00[AMR][1000 genomes]
rs60689590	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61270592	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61375879	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61644103	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73829182	1.00[AMR][1000 genomes]
rs73829183	1.00[AMR][1000 genomes]
rs73829189	1.00[AMR][1000 genomes]
rs73829191	1.00[AMR][1000 genomes]
rs73831214	1.00[AMR][1000 genomes]
rs73831218	1.00[AMR][1000 genomes]
rs73831224	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831226	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831227	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831230	0.88[AFR][1000 genomes]
rs73831232	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831233	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831234	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831236	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831237	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831238	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831239	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831240	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831241	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831242	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831243	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831244	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831245	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831247	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831248	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831249	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831250	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831251	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831252	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831253	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831261	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831267	0.94[AFR][1000 genomes]
rs73831271	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831273	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831274	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831275	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831277	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831279	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831280	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831281	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831283	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831285	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73831287	0.82[AFR][1000 genomes]
rs73831288	0.85[AFR][1000 genomes]
rs73831291	0.85[AFR][1000 genomes]
rs73831292	0.85[AFR][1000 genomes]
rs73831294	0.85[AFR][1000 genomes]
rs73831295	0.85[AFR][1000 genomes]
rs73831296	0.85[AFR][1000 genomes]
rs73831297	0.85[AFR][1000 genomes]
rs73831301	0.85[AFR][1000 genomes]
rs73832606	0.85[AFR][1000 genomes]
rs984347	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:110 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:43348400-43378800	Weak transcription	Hela-S3	cervix
2	chr3:43361200-43377800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr3:43368200-43377200	Weak transcription	Gastric	stomach
4	chr3:43368200-43377600	Weak transcription	Colonic Mucosa	Colon
5	chr3:43368400-43379200	Weak transcription	Stomach Mucosa	stomach
6	chr3:43368400-43379400	Weak transcription	Fetal Brain Male	brain
7	chr3:43369000-43377200	Weak transcription	Rectal Smooth Muscle	rectum
8	chr3:43369000-43378600	Weak transcription	Rectal Mucosa Donor 31	rectum
9	chr3:43369400-43379200	Weak transcription	Small Intestine	intestine
10	chr3:43369600-43377200	Weak transcription	Colon Smooth Muscle	Colon
11	chr3:43370200-43377200	Weak transcription	Skeletal Muscle Male	skeletal muscle
12	chr3:43370400-43377600	Weak transcription	Right Ventricle	heart
13	chr3:43372400-43377200	Weak transcription	NHLF	lung
14	chr3:43372600-43377200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
15	chr3:43372800-43379200	Weak transcription	Brain Inferior Temporal Lobe	brain
16	chr3:43373000-43377200	Weak transcription	Brain Angular Gyrus	brain
17	chr3:43373200-43379200	Weak transcription	HSMMtube	muscle
18	chr3:43373400-43393400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr3:43373600-43377200	Strong transcription	Liver	Liver
20	chr3:43373800-43377200	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
21	chr3:43373800-43383400	Strong transcription	HUVEC	blood vessel
22	chr3:43374000-43377200	Strong transcription	Fetal Lung	lung
23	chr3:43374000-43383400	Strong transcription	Skeletal Muscle Female	skeletal muscle
24	chr3:43374200-43377800	Strong transcription	Rectal Mucosa Donor 29	rectum
25	chr3:43374400-43377200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
26	chr3:43374400-43385000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
27	chr3:43374600-43379200	Strong transcription	Left Ventricle	heart
28	chr3:43375000-43377200	Strong transcription	Primary neutrophils fromperipheralblood	blood
29	chr3:43375200-43378400	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
30	chr3:43375200-43381000	ZNF genes & repeats	Dnd41	blood
31	chr3:43375200-43382000	ZNF genes & repeats	Fetal Muscle Leg	muscle
32	chr3:43375400-43379000	Weak transcription	Placenta Amnion	Placenta Amnion
33	chr3:43375600-43381000	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
34	chr3:43375600-43382000	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
35	chr3:43375800-43377800	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
36	chr3:43375800-43380800	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
37	chr3:43375800-43381000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
38	chr3:43375800-43381400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
39	chr3:43375800-43382200	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
40	chr3:43375800-43382600	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
41	chr3:43376000-43377200	Strong transcription	Fetal Kidney	kidney
42	chr3:43376000-43377600	Weak transcription	Spleen	Spleen
43	chr3:43376000-43380800	ZNF genes & repeats	Primary T cells from cord blood	blood
44	chr3:43376000-43381000	ZNF genes & repeats	IMR90 fetal lung fibroblasts Cell Line	lung
45	chr3:43376200-43381000	ZNF genes & repeats	Primary hematopoietic stem cells	blood
46	chr3:43376200-43381200	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
47	chr3:43376200-43382200	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
48	chr3:43376400-43377200	Weak transcription	Fetal Intestine Large	intestine
49	chr3:43376400-43377200	Weak transcription	Stomach Smooth Muscle	stomach
50	chr3:43376400-43377200	Weak transcription	Thymus	Thymus

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