Variant report
| Variant | rs17075614 |
|---|---|
| Chromosome Location | chr3:43409458-43409459 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:43391600-43436000 | Weak transcription | Colonic Mucosa | Colon |
| 2 | chr3:43392200-43419600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 3 | chr3:43400000-43419400 | Weak transcription | Primary T cells from cord blood | blood |
| 4 | chr3:43401400-43414600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 5 | chr3:43402400-43413400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 6 | chr3:43402600-43413600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 7 | chr3:43403000-43412800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 8 | chr3:43403000-43419400 | Weak transcription | Colon Smooth Muscle | Colon |
| 9 | chr3:43403800-43414600 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 10 | chr3:43404200-43411600 | Weak transcription | Brain Substantia Nigra | brain |
| 11 | chr3:43404200-43413400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 12 | chr3:43404600-43409600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 13 | chr3:43404600-43414600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 14 | chr3:43404800-43412000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 15 | chr3:43405000-43414000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 16 | chr3:43405000-43419400 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 17 | chr3:43405400-43411000 | Weak transcription | Pancreas | Pancrea |
| 18 | chr3:43405400-43414800 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 19 | chr3:43405600-43414800 | Weak transcription | Osteobl | bone |
| 20 | chr3:43405800-43415000 | Weak transcription | HSMM | muscle |
| 21 | chr3:43406800-43414000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 22 | chr3:43406800-43414600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 23 | chr3:43407000-43409800 | Weak transcription | Fetal Intestine Large | intestine |
| 24 | chr3:43407200-43413000 | Weak transcription | Thymus | Thymus |
| 25 | chr3:43407600-43410200 | Weak transcription | Aorta | Aorta |
| 26 | chr3:43407600-43410600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 27 | chr3:43407800-43409800 | Enhancers | Fetal Muscle Leg | muscle |
| 28 | chr3:43407800-43410800 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 29 | chr3:43407800-43411600 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 30 | chr3:43408000-43410200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 31 | chr3:43408000-43412400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 32 | chr3:43408000-43413600 | Weak transcription | Brain Germinal Matrix | brain |
| 33 | chr3:43408000-43413800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 34 | chr3:43408000-43414600 | Weak transcription | Brain Anterior Caudate | brain |
| 35 | chr3:43408000-43415000 | Weak transcription | Fetal Brain Female | brain |
| 36 | chr3:43408200-43410000 | Enhancers | Fetal Muscle Trunk | muscle |
| 37 | chr3:43408200-43410800 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 38 | chr3:43408200-43411000 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 39 | chr3:43408200-43413800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 40 | chr3:43408200-43414200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 41 | chr3:43408200-43414400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 42 | chr3:43408200-43419200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 43 | chr3:43408200-43419800 | Weak transcription | NHLF | lung |
| 44 | chr3:43408400-43410600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 45 | chr3:43408400-43411000 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 46 | chr3:43408400-43412400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 47 | chr3:43408400-43414600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 48 | chr3:43408400-43414800 | Weak transcription | Right Atrium | heart |
| 49 | chr3:43408400-43415200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 50 | chr3:43408400-43418200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
