The 2.0 version of rSNPBase

Variant report

Variant rs17075561
Chromosome Location chr3:43360879-43360880
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:43332400-43361600 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr3:43332800-43377000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr3:43340200-43361200 Weak transcription Brain Inferior Temporal Lobe brain
4 chr3:43340600-43365600 Weak transcription Esophagus oesophagus
5 chr3:43345000-43368200 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr3:43345400-43367400 Weak transcription Rectal Smooth Muscle rectum
7 chr3:43345600-43364400 Weak transcription HMEC breast
8 chr3:43346000-43377000 Weak transcription K562 blood
9 chr3:43346400-43367200 Weak transcription Fetal Lung lung
10 chr3:43348400-43378800 Weak transcription Hela-S3 cervix
11 chr3:43349600-43363200 Weak transcription GM12878-XiMat blood
12 chr3:43350000-43367400 Weak transcription Aorta Aorta
13 chr3:43350400-43361000 Weak transcription Fetal Brain Female brain
14 chr3:43350400-43365800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr3:43351000-43375600 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr3:43352600-43363200 Enhancers Primary T killer naive cells fromperipheralblood blood
17 chr3:43353000-43361600 Weak transcription Primary hematopoietic stem cells blood
18 chr3:43353000-43374000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr3:43353200-43367400 Weak transcription Dnd41 blood
20 chr3:43353400-43375200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr3:43354400-43369600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr3:43355000-43364600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr3:43356000-43362200 Enhancers Primary T helper naive cells fromperipheralblood blood
24 chr3:43356000-43362200 Enhancers Primary T killer memory cells from peripheral blood blood
25 chr3:43356200-43362800 Enhancers Primary T helper cells PMA-I stimulated --
26 chr3:43356400-43362000 Genic enhancers Primary T cells fromperipheralblood blood
27 chr3:43356400-43363600 Enhancers Adipose Nuclei Adipose
28 chr3:43356600-43363600 Genic enhancers Primary T helper cells fromperipheralblood blood
29 chr3:43357800-43363600 Enhancers Primary T helper naive cells from peripheral blood blood
30 chr3:43358200-43361200 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
31 chr3:43358200-43361200 Enhancers Lung lung
32 chr3:43358200-43361200 Enhancers Pancreas Pancrea
33 chr3:43358200-43361400 Genic enhancers Thymus Thymus
34 chr3:43358200-43362000 Enhancers Skeletal Muscle Male skeletal muscle
35 chr3:43358400-43361000 Strong transcription Primary hematopoietic stem cells short term culture blood
36 chr3:43359000-43361400 Enhancers Right Atrium heart
37 chr3:43359000-43362200 Genic enhancers Primary T cells from cord blood blood
38 chr3:43359200-43362000 Enhancers Ovary ovary
39 chr3:43359200-43367000 Weak transcription Colon Smooth Muscle Colon
40 chr3:43359400-43361200 Enhancers Left Ventricle heart
41 chr3:43359400-43361400 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr3:43359400-43361400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr3:43359400-43361400 Weak transcription Fetal Muscle Trunk muscle
44 chr3:43359400-43366400 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr3:43359400-43366800 Weak transcription Small Intestine intestine
46 chr3:43359400-43367800 Weak transcription Stomach Mucosa stomach
47 chr3:43359400-43374000 Weak transcription Placenta Placenta
48 chr3:43359400-43376600 Weak transcription iPS-20b Cell Line embryonic stem cell
49 chr3:43359600-43361000 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr3:43359600-43361000 Weak transcription iPS-15b Cell Line embryonic stem cell

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Last update: Aug 31, 2015