Variant report
| Variant | rs17075525 |
|---|---|
| Chromosome Location | chr3:43345633-43345634 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:43329200-43346800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 2 | chr3:43329400-43346400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 3 | chr3:43330800-43359000 | Weak transcription | Fetal Brain Male | brain |
| 4 | chr3:43331400-43358200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 5 | chr3:43332400-43361600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 6 | chr3:43332800-43377000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 7 | chr3:43335400-43351000 | Weak transcription | Fetal Stomach | stomach |
| 8 | chr3:43337000-43354400 | Weak transcription | A549 | lung |
| 9 | chr3:43337400-43358200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 10 | chr3:43339600-43356200 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 11 | chr3:43340000-43358600 | Weak transcription | Colonic Mucosa | Colon |
| 12 | chr3:43340200-43347000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 13 | chr3:43340200-43359000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 14 | chr3:43340200-43361200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 15 | chr3:43340400-43358200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 16 | chr3:43340400-43358200 | Weak transcription | Brain Hippocampus Middle | brain |
| 17 | chr3:43340600-43346000 | Weak transcription | Fetal Heart | heart |
| 18 | chr3:43340600-43349200 | Weak transcription | Brain Substantia Nigra | brain |
| 19 | chr3:43340600-43349800 | Weak transcription | Aorta | Aorta |
| 20 | chr3:43340600-43352400 | Weak transcription | Right Ventricle | heart |
| 21 | chr3:43340600-43352400 | Weak transcription | Small Intestine | intestine |
| 22 | chr3:43340600-43358600 | Weak transcription | Brain Angular Gyrus | brain |
| 23 | chr3:43340600-43358800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 24 | chr3:43340600-43358800 | Weak transcription | Colon Smooth Muscle | Colon |
| 25 | chr3:43340600-43359200 | Weak transcription | Gastric | stomach |
| 26 | chr3:43340600-43365600 | Weak transcription | Esophagus | oesophagus |
| 27 | chr3:43341000-43359000 | Weak transcription | Spleen | Spleen |
| 28 | chr3:43341200-43348200 | Genic enhancers | Primary T helper cells fromperipheralblood | blood |
| 29 | chr3:43341400-43345800 | Genic enhancers | Primary T regulatory cells fromperipheralblood | blood |
| 30 | chr3:43341600-43346400 | Genic enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 31 | chr3:43342000-43359200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 32 | chr3:43342200-43354600 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 33 | chr3:43342600-43355800 | Strong transcription | HUVEC | blood vessel |
| 34 | chr3:43343200-43346200 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 35 | chr3:43343200-43346400 | Strong transcription | NHEK | skin |
| 36 | chr3:43343200-43356400 | Weak transcription | Fetal Intestine Small | intestine |
| 37 | chr3:43343400-43348000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 38 | chr3:43343800-43346200 | Genic enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
| 39 | chr3:43343800-43357200 | Strong transcription | Fetal Thymus | thymus |
| 40 | chr3:43344000-43347400 | Strong transcription | Fetal Intestine Large | intestine |
| 41 | chr3:43344000-43355400 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 42 | chr3:43344200-43358200 | Weak transcription | Psoas Muscle | Psoas |
| 43 | chr3:43344400-43346400 | Strong transcription | HepG2 | liver |
| 44 | chr3:43344400-43346800 | Strong transcription | Primary B cells from cord blood | blood |
| 45 | chr3:43344400-43347800 | Strong transcription | Dnd41 | blood |
| 46 | chr3:43344400-43348400 | Genic enhancers | Primary T helper cells PMA-I stimulated | -- |
| 47 | chr3:43344600-43345800 | Strong transcription | Thymus | Thymus |
| 48 | chr3:43344600-43345800 | Strong transcription | NH-A | brain |
| 49 | chr3:43344600-43346000 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 50 | chr3:43344600-43346000 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
