Variant report
| Variant | rs55887904 |
|---|---|
| Chromosome Location | chr3:43374972-43374973 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:43332800-43377000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 2 | chr3:43346000-43377000 | Weak transcription | K562 | blood |
| 3 | chr3:43348400-43378800 | Weak transcription | Hela-S3 | cervix |
| 4 | chr3:43351000-43375600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 5 | chr3:43353400-43375200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 6 | chr3:43359400-43376600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 7 | chr3:43359600-43375400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 8 | chr3:43359600-43376200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 9 | chr3:43360400-43375600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 10 | chr3:43360400-43376200 | Weak transcription | Brain Germinal Matrix | brain |
| 11 | chr3:43361200-43377800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 12 | chr3:43367800-43375800 | Weak transcription | Aorta | Aorta |
| 13 | chr3:43368200-43375000 | Weak transcription | Fetal Stomach | stomach |
| 14 | chr3:43368200-43375600 | Weak transcription | Spleen | Spleen |
| 15 | chr3:43368200-43375800 | Weak transcription | Pancreas | Pancrea |
| 16 | chr3:43368200-43376200 | Weak transcription | Lung | lung |
| 17 | chr3:43368200-43377000 | Weak transcription | Ovary | ovary |
| 18 | chr3:43368200-43377200 | Weak transcription | Gastric | stomach |
| 19 | chr3:43368200-43377600 | Weak transcription | Colonic Mucosa | Colon |
| 20 | chr3:43368400-43376600 | Weak transcription | Osteobl | bone |
| 21 | chr3:43368400-43379200 | Weak transcription | Stomach Mucosa | stomach |
| 22 | chr3:43368400-43379400 | Weak transcription | Fetal Brain Male | brain |
| 23 | chr3:43368800-43375800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 24 | chr3:43368800-43376800 | Weak transcription | HepG2 | liver |
| 25 | chr3:43369000-43375000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 26 | chr3:43369000-43375600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 27 | chr3:43369000-43375800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 28 | chr3:43369000-43377200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 29 | chr3:43369000-43378600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 30 | chr3:43369200-43375600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 31 | chr3:43369200-43376600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 32 | chr3:43369400-43375400 | Weak transcription | Fetal Intestine Small | intestine |
| 33 | chr3:43369400-43376000 | Weak transcription | Fetal Kidney | kidney |
| 34 | chr3:43369400-43379200 | Weak transcription | Small Intestine | intestine |
| 35 | chr3:43369600-43377200 | Weak transcription | Colon Smooth Muscle | Colon |
| 36 | chr3:43370200-43377200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 37 | chr3:43370400-43376800 | Weak transcription | Brain Anterior Caudate | brain |
| 38 | chr3:43370400-43376800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 39 | chr3:43370400-43377000 | Weak transcription | Brain Hippocampus Middle | brain |
| 40 | chr3:43370400-43377600 | Weak transcription | Right Ventricle | heart |
| 41 | chr3:43370600-43375000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 42 | chr3:43370600-43375400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 43 | chr3:43370600-43376000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 44 | chr3:43370600-43376600 | Weak transcription | NHEK | skin |
| 45 | chr3:43370600-43376800 | Weak transcription | HMEC | breast |
| 46 | chr3:43371200-43376800 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 47 | chr3:43372200-43375800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 48 | chr3:43372400-43375600 | Weak transcription | Thymus | Thymus |
| 49 | chr3:43372400-43375800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 50 | chr3:43372400-43376600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
