Variant report
| Variant | rs58216554 |
|---|---|
| Chromosome Location | chr3:43415926-43415927 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:43391600-43436000 | Weak transcription | Colonic Mucosa | Colon |
| 2 | chr3:43392200-43419600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 3 | chr3:43400000-43419400 | Weak transcription | Primary T cells from cord blood | blood |
| 4 | chr3:43403000-43419400 | Weak transcription | Colon Smooth Muscle | Colon |
| 5 | chr3:43405000-43419400 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 6 | chr3:43408200-43419200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 7 | chr3:43408200-43419800 | Weak transcription | NHLF | lung |
| 8 | chr3:43408400-43418200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 9 | chr3:43408400-43419600 | Weak transcription | Fetal Intestine Small | intestine |
| 10 | chr3:43408600-43431200 | Weak transcription | Duodenum Mucosa | Duodenum |
| 11 | chr3:43408800-43429800 | Weak transcription | Right Ventricle | heart |
| 12 | chr3:43408800-43431000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 13 | chr3:43409200-43420400 | Weak transcription | HSMMtube | muscle |
| 14 | chr3:43411600-43419600 | Weak transcription | Left Ventricle | heart |
| 15 | chr3:43411800-43421000 | Weak transcription | Lung | lung |
| 16 | chr3:43412400-43416200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 17 | chr3:43413000-43419400 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 18 | chr3:43413400-43416000 | Enhancers | Fetal Muscle Trunk | muscle |
| 19 | chr3:43413400-43416200 | Enhancers | Fetal Muscle Leg | muscle |
| 20 | chr3:43414000-43416200 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 21 | chr3:43414200-43419200 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 22 | chr3:43414400-43418200 | Weak transcription | Thymus | Thymus |
| 23 | chr3:43414400-43418800 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 24 | chr3:43414400-43419600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 25 | chr3:43415200-43418800 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 26 | chr3:43415200-43420400 | Weak transcription | NH-A | brain |
| 27 | chr3:43415400-43419200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 28 | chr3:43415400-43419600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 29 | chr3:43415400-43420000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 30 | chr3:43415400-43420200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 31 | chr3:43415400-43420200 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 32 | chr3:43415400-43420200 | Weak transcription | Fetal Stomach | stomach |
| 33 | chr3:43415400-43420200 | Weak transcription | Right Atrium | heart |
| 34 | chr3:43415400-43421000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 35 | chr3:43415600-43419400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 36 | chr3:43415600-43419400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 37 | chr3:43415600-43419400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 38 | chr3:43415600-43419400 | Weak transcription | Osteobl | bone |
| 39 | chr3:43415600-43419600 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 40 | chr3:43415600-43419800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 41 | chr3:43415600-43420000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 42 | chr3:43415600-43420200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 43 | chr3:43415600-43420200 | Weak transcription | HSMM | muscle |
| 44 | chr3:43415800-43417000 | Weak transcription | Fetal Thymus | thymus |
| 45 | chr3:43415800-43419600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 46 | chr3:43415800-43419800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 47 | chr3:43415800-43419800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 48 | chr3:43415800-43419800 | Weak transcription | HUVEC | blood vessel |
| 49 | chr3:43415800-43420000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
