Variant report
| Variant | rs58636339 |
|---|---|
| Chromosome Location | chr3:43369670-43369671 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:43332800-43377000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 2 | chr3:43346000-43377000 | Weak transcription | K562 | blood |
| 3 | chr3:43348400-43378800 | Weak transcription | Hela-S3 | cervix |
| 4 | chr3:43351000-43375600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 5 | chr3:43353000-43374000 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 6 | chr3:43353400-43375200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 7 | chr3:43359400-43374000 | Weak transcription | Placenta | Placenta |
| 8 | chr3:43359400-43376600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 9 | chr3:43359600-43371800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 10 | chr3:43359600-43372000 | Weak transcription | NHLF | lung |
| 11 | chr3:43359600-43372200 | Weak transcription | HSMM | muscle |
| 12 | chr3:43359600-43375400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 13 | chr3:43359600-43376200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 14 | chr3:43359800-43369800 | Weak transcription | NHEK | skin |
| 15 | chr3:43360400-43375600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 16 | chr3:43360400-43376200 | Weak transcription | Brain Germinal Matrix | brain |
| 17 | chr3:43361200-43374600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 18 | chr3:43361200-43377800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 19 | chr3:43363600-43374000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 20 | chr3:43364200-43371600 | Enhancers | Primary T helper cells PMA-I stimulated | -- |
| 21 | chr3:43364800-43370600 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 22 | chr3:43365000-43370400 | Enhancers | Primary T killer memory cells from peripheral blood | blood |
| 23 | chr3:43365200-43370400 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 24 | chr3:43365200-43371200 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 25 | chr3:43365200-43371200 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
| 26 | chr3:43365400-43370200 | Enhancers | Primary T helper cells fromperipheralblood | blood |
| 27 | chr3:43365400-43370400 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
| 28 | chr3:43365400-43370400 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
| 29 | chr3:43365400-43373600 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 30 | chr3:43365600-43369800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 31 | chr3:43365600-43370200 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 32 | chr3:43365600-43370200 | Enhancers | Primary hematopoietic stem cells | blood |
| 33 | chr3:43365600-43370600 | Enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
| 34 | chr3:43365800-43370400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 35 | chr3:43366000-43369800 | Enhancers | Monocytes-CD14+_RO01746 | blood |
| 36 | chr3:43366200-43370400 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 37 | chr3:43366200-43370600 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 38 | chr3:43366400-43370200 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 39 | chr3:43366400-43370400 | Enhancers | Duodenum Smooth Muscle | Duodenum |
| 40 | chr3:43366600-43370400 | Enhancers | Fetal Thymus | thymus |
| 41 | chr3:43366600-43370600 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 42 | chr3:43367200-43370200 | Enhancers | Thymus | Thymus |
| 43 | chr3:43367200-43370400 | Enhancers | Brain Hippocampus Middle | brain |
| 44 | chr3:43367200-43370600 | Enhancers | Brain Substantia Nigra | brain |
| 45 | chr3:43367600-43370000 | Enhancers | Stomach Smooth Muscle | stomach |
| 46 | chr3:43367600-43370400 | Enhancers | Brain Cingulate Gyrus | brain |
| 47 | chr3:43367600-43370400 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 48 | chr3:43367600-43370400 | Enhancers | HSMMtube | muscle |
| 49 | chr3:43367800-43370400 | Enhancers | Brain Anterior Caudate | brain |
| 50 | chr3:43367800-43375800 | Weak transcription | Aorta | Aorta |
