The 2.0 version of rSNPBase

Variant report

Variant rs10405721
Chromosome Location chr19:45597276-45597277
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:45594000-45598200 Active TSS Pancreatic Islets Pancreatic Islet
2 chr19:45594200-45597400 Active TSS ES-I3 Cell Line embryonic stem cell
3 chr19:45594200-45597800 Active TSS HUES48 Cell Line embryonic stem cell
4 chr19:45594200-45598200 Active TSS iPS-18 Cell Line embryonic stem cell
5 chr19:45594400-45597400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
6 chr19:45594400-45598200 Active TSS HUES64 Cell Line embryonic stem cell
7 chr19:45594400-45599200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
8 chr19:45594600-45597400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr19:45594600-45597600 Active TSS A549 lung
10 chr19:45594600-45597600 Active TSS NHDF-Ad bronchial
11 chr19:45594800-45597400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
12 chr19:45594800-45597400 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
13 chr19:45594800-45597400 Active TSS NHLF lung
14 chr19:45594800-45597600 Active TSS HUES6 Cell Line embryonic stem cell
15 chr19:45594800-45597600 Active TSS iPS-15b Cell Line embryonic stem cell
16 chr19:45595000-45597600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr19:45595000-45597600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr19:45596000-45597400 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
19 chr19:45596000-45597400 Active TSS Fetal Intestine Large intestine
20 chr19:45596000-45597400 Active TSS Fetal Intestine Small intestine
21 chr19:45596200-45597400 Bivalent/Poised TSS HepG2 liver
22 chr19:45596600-45597400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
23 chr19:45596600-45598400 Flanking Active TSS Adipose Nuclei Adipose
24 chr19:45596800-45597400 Flanking Active TSS Primary monocytes fromperipheralblood blood
25 chr19:45596800-45597400 Flanking Active TSS Primary B cells from cord blood blood
26 chr19:45596800-45597400 Flanking Active TSS Primary B cells from peripheral blood blood
27 chr19:45596800-45597400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
28 chr19:45596800-45597400 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
29 chr19:45596800-45597400 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
30 chr19:45596800-45597400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
31 chr19:45596800-45597400 Flanking Active TSS Placenta Placenta
32 chr19:45596800-45597400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
33 chr19:45596800-45597600 Flanking Active TSS Primary T cells fromperipheralblood blood
34 chr19:45596800-45597600 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
35 chr19:45596800-45597600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr19:45596800-45597600 Flanking Active TSS Liver Liver
37 chr19:45596800-45597800 Flanking Active TSS Primary hematopoietic stem cells blood
38 chr19:45596800-45597800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
39 chr19:45596800-45597800 Flanking Active TSS Brain Inferior Temporal Lobe brain
40 chr19:45596800-45598200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr19:45596800-45598200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
42 chr19:45596800-45598200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
43 chr19:45596800-45598400 Flanking Active TSS Brain Hippocampus Middle brain
44 chr19:45597000-45597400 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr19:45597000-45597400 Flanking Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr19:45597000-45597400 Flanking Active TSS H9 Cell Line embryonic stem cell
47 chr19:45597000-45597400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
48 chr19:45597000-45597400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
49 chr19:45597000-45597400 Flanking Active TSS Brain Substantia Nigra brain
50 chr19:45597000-45597400 Flanking Active TSS Fetal Brain Male brain

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Last update: Aug 31, 2015