The 2.0 version of rSNPBase

Variant report

Variant rs10415674
Chromosome Location chr19:45616385-45616386
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:45603800-45619600 Weak transcription HSMMtube muscle
2 chr19:45606600-45618000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
3 chr19:45606600-45623400 Weak transcription H9 Cell Line embryonic stem cell
4 chr19:45606600-45624800 Weak transcription NHEK skin
5 chr19:45606800-45616600 Weak transcription H1 Cell Line embryonic stem cell
6 chr19:45606800-45621000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr19:45606800-45634000 Weak transcription iPS-20b Cell Line embryonic stem cell
8 chr19:45607200-45625600 Weak transcription NHLF lung
9 chr19:45607600-45626600 Weak transcription Fetal Brain Male brain
10 chr19:45607800-45620400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr19:45607800-45620600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr19:45608000-45616600 Weak transcription Brain Anterior Caudate brain
13 chr19:45608000-45616800 Weak transcription Placenta Amnion Placenta Amnion
14 chr19:45608000-45618400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr19:45608000-45619800 Weak transcription Brain Germinal Matrix brain
16 chr19:45608000-45620800 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr19:45608000-45639400 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr19:45608200-45616600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr19:45608200-45619800 Weak transcription Adipose Nuclei Adipose
20 chr19:45608400-45616600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr19:45608400-45616600 Weak transcription Stomach Smooth Muscle stomach
22 chr19:45608400-45629200 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr19:45608600-45618600 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr19:45608600-45619400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr19:45608600-45619600 Weak transcription Psoas Muscle Psoas
26 chr19:45608600-45621000 Weak transcription Fetal Brain Female brain
27 chr19:45608800-45618600 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr19:45608800-45618600 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr19:45608800-45619600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr19:45609000-45616400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr19:45609000-45618600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr19:45609000-45621400 Weak transcription Right Atrium heart
33 chr19:45609200-45616600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr19:45609200-45619400 Weak transcription Brain Angular Gyrus brain
35 chr19:45609200-45620600 Weak transcription Brain Cingulate Gyrus brain
36 chr19:45609200-45620600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr19:45609400-45616400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr19:45609400-45616600 Weak transcription Placenta Placenta
39 chr19:45609400-45618200 Weak transcription Brain Hippocampus Middle brain
40 chr19:45610400-45644400 Weak transcription Aorta Aorta
41 chr19:45611200-45618600 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr19:45611400-45616400 Weak transcription Primary B cells from cord blood blood
43 chr19:45611600-45619200 Weak transcription Thymus Thymus
44 chr19:45613200-45618400 Weak transcription Dnd41 blood
45 chr19:45613200-45623600 Weak transcription Ovary ovary
46 chr19:45613400-45621800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr19:45614200-45616600 Enhancers Rectal Mucosa Donor 31 rectum
48 chr19:45614200-45616800 Enhancers Fetal Intestine Large intestine
49 chr19:45614200-45623000 Enhancers Stomach Mucosa stomach
50 chr19:45614400-45616400 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015