Variant report
| Variant | rs12459386 |
|---|---|
| Chromosome Location | chr19:45627534-45627535 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr19:45606800-45634000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 2 | chr19:45608000-45639400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 3 | chr19:45608400-45629200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 4 | chr19:45610400-45644400 | Weak transcription | Aorta | Aorta |
| 5 | chr19:45615600-45629800 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 6 | chr19:45617000-45651600 | Weak transcription | Fetal Kidney | kidney |
| 7 | chr19:45617200-45627800 | Enhancers | Fetal Thymus | thymus |
| 8 | chr19:45617400-45633200 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 9 | chr19:45617800-45640000 | Weak transcription | Fetal Lung | lung |
| 10 | chr19:45618800-45639600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 11 | chr19:45618800-45639600 | Weak transcription | Brain Substantia Nigra | brain |
| 12 | chr19:45620000-45633400 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 13 | chr19:45620600-45627800 | Genic enhancers | Fetal Intestine Small | intestine |
| 14 | chr19:45620800-45643800 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 15 | chr19:45621000-45629400 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 16 | chr19:45621000-45634000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 17 | chr19:45621000-45634000 | Weak transcription | HSMMtube | muscle |
| 18 | chr19:45621200-45629200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 19 | chr19:45621200-45629600 | Weak transcription | HepG2 | liver |
| 20 | chr19:45621200-45633800 | Weak transcription | Osteobl | bone |
| 21 | chr19:45621200-45639800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 22 | chr19:45621200-45644000 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 23 | chr19:45621400-45629200 | Weak transcription | A549 | lung |
| 24 | chr19:45621400-45633400 | Weak transcription | Dnd41 | blood |
| 25 | chr19:45621400-45635000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 26 | chr19:45621600-45629200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 27 | chr19:45621600-45629200 | Weak transcription | Brain Anterior Caudate | brain |
| 28 | chr19:45621600-45643800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 29 | chr19:45621800-45629200 | Weak transcription | Small Intestine | intestine |
| 30 | chr19:45621800-45639800 | Weak transcription | Colon Smooth Muscle | Colon |
| 31 | chr19:45622000-45629000 | Weak transcription | Brain Hippocampus Middle | brain |
| 32 | chr19:45622000-45629000 | Weak transcription | K562 | blood |
| 33 | chr19:45622000-45639200 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 34 | chr19:45622200-45629200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 35 | chr19:45622200-45629200 | Weak transcription | Brain Angular Gyrus | brain |
| 36 | chr19:45622200-45629200 | Weak transcription | Right Atrium | heart |
| 37 | chr19:45622200-45633600 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 38 | chr19:45622200-45639600 | Weak transcription | Fetal Brain Female | brain |
| 39 | chr19:45622800-45629000 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 40 | chr19:45623000-45633600 | Weak transcription | HSMM | muscle |
| 41 | chr19:45623200-45628000 | Enhancers | Stomach Mucosa | stomach |
| 42 | chr19:45623200-45629000 | Weak transcription | Pancreas | Pancrea |
| 43 | chr19:45623800-45627600 | Enhancers | Fetal Muscle Leg | muscle |
| 44 | chr19:45624200-45628000 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 45 | chr19:45624200-45628000 | Strong transcription | Fetal Stomach | stomach |
| 46 | chr19:45624400-45627800 | Genic enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 47 | chr19:45624400-45628000 | Enhancers | Esophagus | oesophagus |
| 48 | chr19:45624400-45628200 | Enhancers | Placenta Amnion | Placenta Amnion |
| 49 | chr19:45624400-45629600 | Enhancers | Placenta | Placenta |
| 50 | chr19:45624600-45627600 | Genic enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
