The 2.0 version of rSNPBase

Variant report

Variant rs10423555
Chromosome Location chr19:45617769-45617770
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:45603800-45619600 Weak transcription HSMMtube muscle
2 chr19:45606600-45618000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
3 chr19:45606600-45623400 Weak transcription H9 Cell Line embryonic stem cell
4 chr19:45606600-45624800 Weak transcription NHEK skin
5 chr19:45606800-45621000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr19:45606800-45634000 Weak transcription iPS-20b Cell Line embryonic stem cell
7 chr19:45607200-45625600 Weak transcription NHLF lung
8 chr19:45607600-45626600 Weak transcription Fetal Brain Male brain
9 chr19:45607800-45620400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr19:45607800-45620600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr19:45608000-45618400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr19:45608000-45619800 Weak transcription Brain Germinal Matrix brain
13 chr19:45608000-45620800 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr19:45608000-45639400 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr19:45608200-45619800 Weak transcription Adipose Nuclei Adipose
16 chr19:45608400-45629200 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr19:45608600-45618600 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr19:45608600-45619400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr19:45608600-45619600 Weak transcription Psoas Muscle Psoas
20 chr19:45608600-45621000 Weak transcription Fetal Brain Female brain
21 chr19:45608800-45618600 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr19:45608800-45618600 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr19:45608800-45619600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr19:45609000-45618600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr19:45609000-45621400 Weak transcription Right Atrium heart
26 chr19:45609200-45619400 Weak transcription Brain Angular Gyrus brain
27 chr19:45609200-45620600 Weak transcription Brain Cingulate Gyrus brain
28 chr19:45609200-45620600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr19:45609400-45618200 Weak transcription Brain Hippocampus Middle brain
30 chr19:45610400-45644400 Weak transcription Aorta Aorta
31 chr19:45611200-45618600 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr19:45611600-45619200 Weak transcription Thymus Thymus
33 chr19:45613200-45618400 Weak transcription Dnd41 blood
34 chr19:45613200-45623600 Weak transcription Ovary ovary
35 chr19:45613400-45621800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr19:45614200-45623000 Enhancers Stomach Mucosa stomach
37 chr19:45614400-45618000 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr19:45614400-45618600 Weak transcription Monocytes-CD14+_RO01746 blood
39 chr19:45614400-45619200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr19:45614400-45619400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr19:45614400-45619400 Weak transcription Left Ventricle heart
42 chr19:45614600-45618800 Weak transcription Primary monocytes fromperipheralblood blood
43 chr19:45614600-45619200 Weak transcription K562 blood
44 chr19:45614800-45619800 Genic enhancers Fetal Intestine Small intestine
45 chr19:45615000-45619200 Weak transcription Spleen Spleen
46 chr19:45615000-45619600 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr19:45615400-45619400 Enhancers Gastric stomach
48 chr19:45615600-45617800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr19:45615600-45618400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
50 chr19:45615600-45618800 Enhancers Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015