Variant report
| Variant | rs2011438 |
|---|---|
| Chromosome Location | chr19:45651219-45651220 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr19:45617000-45651600 | Weak transcription | Fetal Kidney | kidney |
| 2 | chr19:45625000-45654200 | Weak transcription | NHDF-Ad | bronchial |
| 3 | chr19:45626200-45653400 | Weak transcription | Primary hematopoietic stem cells | blood |
| 4 | chr19:45627600-45655600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 5 | chr19:45630800-45653200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 6 | chr19:45633600-45655200 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 7 | chr19:45634400-45653000 | Weak transcription | NH-A | brain |
| 8 | chr19:45638800-45652400 | Weak transcription | Small Intestine | intestine |
| 9 | chr19:45639800-45656800 | Weak transcription | K562 | blood |
| 10 | chr19:45640000-45653800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 11 | chr19:45640000-45654400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 12 | chr19:45640400-45655000 | Weak transcription | Fetal Heart | heart |
| 13 | chr19:45641400-45654600 | Weak transcription | HSMM | muscle |
| 14 | chr19:45641600-45654000 | Weak transcription | HSMMtube | muscle |
| 15 | chr19:45641800-45653800 | Weak transcription | Stomach Mucosa | stomach |
| 16 | chr19:45642000-45652600 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 17 | chr19:45642000-45653600 | Strong transcription | Fetal Intestine Small | intestine |
| 18 | chr19:45642000-45655200 | Weak transcription | GM12878-XiMat | blood |
| 19 | chr19:45642000-45655400 | Weak transcription | Right Atrium | heart |
| 20 | chr19:45642400-45652600 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 21 | chr19:45642800-45651400 | Strong transcription | Colonic Mucosa | Colon |
| 22 | chr19:45642800-45651600 | Strong transcription | Fetal Brain Female | brain |
| 23 | chr19:45642800-45652000 | Strong transcription | Fetal Muscle Leg | muscle |
| 24 | chr19:45642800-45652200 | Strong transcription | Fetal Intestine Large | intestine |
| 25 | chr19:45642800-45652400 | Strong transcription | Thymus | Thymus |
| 26 | chr19:45642800-45653000 | Strong transcription | Fetal Muscle Trunk | muscle |
| 27 | chr19:45642800-45653400 | Strong transcription | Fetal Stomach | stomach |
| 28 | chr19:45643000-45653200 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 29 | chr19:45643000-45654200 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 30 | chr19:45643000-45654200 | Strong transcription | Gastric | stomach |
| 31 | chr19:45643400-45653600 | Strong transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 32 | chr19:45643600-45651600 | Strong transcription | Skeletal Muscle Male | skeletal muscle |
| 33 | chr19:45643600-45653000 | Strong transcription | Pancreas | Pancrea |
| 34 | chr19:45643600-45654000 | Weak transcription | HMEC | breast |
| 35 | chr19:45643800-45652800 | Strong transcription | Right Ventricle | heart |
| 36 | chr19:45643800-45653400 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
| 37 | chr19:45644000-45651800 | Strong transcription | Brain Germinal Matrix | brain |
| 38 | chr19:45644000-45652000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 39 | chr19:45644000-45652000 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 40 | chr19:45644200-45651400 | Strong transcription | Fetal Thymus | thymus |
| 41 | chr19:45644200-45651800 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 42 | chr19:45644200-45651800 | Strong transcription | Primary T cells from cord blood | blood |
| 43 | chr19:45644200-45652000 | Strong transcription | Duodenum Mucosa | Duodenum |
| 44 | chr19:45644400-45652000 | Strong transcription | Ovary | ovary |
| 45 | chr19:45644600-45653800 | Weak transcription | HepG2 | liver |
| 46 | chr19:45646000-45655000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 47 | chr19:45646600-45654000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 48 | chr19:45646600-45655000 | Weak transcription | Primary B cells from cord blood | blood |
| 49 | chr19:45646800-45655000 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 50 | chr19:45647000-45652000 | Strong transcription | NHLF | lung |
