Variant report
| Variant | rs1541926 |
|---|---|
| Chromosome Location | chr19:45602478-45602479 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr19:45597400-45602800 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
| 2 | chr19:45597400-45603000 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
| 3 | chr19:45597400-45603000 | Enhancers | Fetal Brain Male | brain |
| 4 | chr19:45597400-45603200 | Enhancers | Left Ventricle | heart |
| 5 | chr19:45597400-45604600 | Enhancers | Placenta | Placenta |
| 6 | chr19:45597400-45609400 | Enhancers | Stomach Mucosa | stomach |
| 7 | chr19:45597600-45603000 | Enhancers | Primary T cells fromperipheralblood | blood |
| 8 | chr19:45597600-45603000 | Enhancers | Lung | lung |
| 9 | chr19:45597600-45606200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 10 | chr19:45597600-45609200 | Enhancers | Pancreas | Pancrea |
| 11 | chr19:45597800-45602600 | Enhancers | Primary T helper cells PMA-I stimulated | -- |
| 12 | chr19:45597800-45602800 | Enhancers | Primary T helper cells fromperipheralblood | blood |
| 13 | chr19:45597800-45603000 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 14 | chr19:45597800-45604000 | Genic enhancers | Fetal Muscle Leg | muscle |
| 15 | chr19:45597800-45604200 | Enhancers | Psoas Muscle | Psoas |
| 16 | chr19:45598000-45604000 | Enhancers | Duodenum Smooth Muscle | Duodenum |
| 17 | chr19:45598200-45604400 | Enhancers | Gastric | stomach |
| 18 | chr19:45598200-45606000 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 19 | chr19:45598400-45604000 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 20 | chr19:45598400-45605600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 21 | chr19:45598400-45606000 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 22 | chr19:45598400-45606000 | Weak transcription | Primary hematopoietic stem cells | blood |
| 23 | chr19:45598400-45606000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 24 | chr19:45598400-45606600 | Genic enhancers | Fetal Intestine Small | intestine |
| 25 | chr19:45598600-45602800 | Enhancers | Liver | Liver |
| 26 | chr19:45599000-45602600 | Enhancers | Ovary | ovary |
| 27 | chr19:45599000-45603600 | Genic enhancers | Fetal Thymus | thymus |
| 28 | chr19:45599200-45603600 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
| 29 | chr19:45599200-45603600 | Flanking Active TSS | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 30 | chr19:45599400-45605800 | Weak transcription | Primary B cells from peripheral blood | blood |
| 31 | chr19:45599800-45603000 | Genic enhancers | Spleen | Spleen |
| 32 | chr19:45599800-45605800 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 33 | chr19:45600000-45603800 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 34 | chr19:45600000-45604000 | Enhancers | HMEC | breast |
| 35 | chr19:45600000-45604400 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
| 36 | chr19:45600000-45606200 | Enhancers | Fetal Intestine Large | intestine |
| 37 | chr19:45600000-45607800 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
| 38 | chr19:45600200-45602600 | Flanking Active TSS | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 39 | chr19:45600200-45603000 | Genic enhancers | Breast Myoepithelial Primary Cells | Breast |
| 40 | chr19:45600200-45603600 | Enhancers | H1 Cell Line | embryonic stem cell |
| 41 | chr19:45600200-45605400 | Enhancers | Placenta Amnion | Placenta Amnion |
| 42 | chr19:45600400-45602600 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 43 | chr19:45600400-45604000 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 44 | chr19:45600400-45604400 | Genic enhancers | Fetal Stomach | stomach |
| 45 | chr19:45600400-45605000 | Weak transcription | GM12878-XiMat | blood |
| 46 | chr19:45600600-45602600 | Enhancers | Right Ventricle | heart |
| 47 | chr19:45600600-45603000 | Flanking Active TSS | HepG2 | liver |
| 48 | chr19:45600600-45603400 | Enhancers | ES-WA7 Cell Line | embryonic stem cell |
| 49 | chr19:45600600-45603600 | Enhancers | Fetal Heart | heart |
| 50 | chr19:45600800-45602600 | Enhancers | Fetal Lung | lung |
