The 2.0 version of rSNPBase

Variant report

Variant rs28657408
Chromosome Location chr19:45631805-45631806
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:45606800-45634000 Weak transcription iPS-20b Cell Line embryonic stem cell
2 chr19:45608000-45639400 Weak transcription HUES64 Cell Line embryonic stem cell
3 chr19:45610400-45644400 Weak transcription Aorta Aorta
4 chr19:45617000-45651600 Weak transcription Fetal Kidney kidney
5 chr19:45617400-45633200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr19:45617800-45640000 Weak transcription Fetal Lung lung
7 chr19:45618800-45639600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr19:45618800-45639600 Weak transcription Brain Substantia Nigra brain
9 chr19:45620000-45633400 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr19:45620800-45643800 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr19:45621000-45634000 Weak transcription Muscle Satellite Cultured Cells --
12 chr19:45621000-45634000 Weak transcription HSMMtube muscle
13 chr19:45621200-45633800 Weak transcription Osteobl bone
14 chr19:45621200-45639800 Weak transcription Rectal Smooth Muscle rectum
15 chr19:45621200-45644000 Weak transcription Primary monocytes fromperipheralblood blood
16 chr19:45621400-45633400 Weak transcription Dnd41 blood
17 chr19:45621400-45635000 Weak transcription Stomach Smooth Muscle stomach
18 chr19:45621600-45643800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr19:45621800-45639800 Weak transcription Colon Smooth Muscle Colon
20 chr19:45622000-45639200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr19:45622200-45633600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr19:45622200-45639600 Weak transcription Fetal Brain Female brain
23 chr19:45623000-45633600 Weak transcription HSMM muscle
24 chr19:45625000-45654200 Weak transcription NHDF-Ad bronchial
25 chr19:45625600-45637000 Weak transcription Primary B cells from cord blood blood
26 chr19:45625800-45636800 Weak transcription Primary T cells from cord blood blood
27 chr19:45626200-45644400 Weak transcription Ovary ovary
28 chr19:45626200-45653400 Weak transcription Primary hematopoietic stem cells blood
29 chr19:45627000-45639200 Weak transcription Brain Germinal Matrix brain
30 chr19:45627200-45640000 Weak transcription Adipose Nuclei Adipose
31 chr19:45627400-45633200 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr19:45627400-45633400 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr19:45627400-45633400 Weak transcription NHLF lung
34 chr19:45627400-45633600 Weak transcription HMEC breast
35 chr19:45627600-45633800 Weak transcription NHEK skin
36 chr19:45627600-45655600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr19:45627800-45644000 Weak transcription Monocytes-CD14+_RO01746 blood
38 chr19:45628000-45632000 Weak transcription Lung lung
39 chr19:45628000-45633400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr19:45628000-45634000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr19:45628000-45634200 Weak transcription Esophagus oesophagus
42 chr19:45629200-45633600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr19:45629400-45633400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr19:45629400-45633600 Weak transcription iPS-18 Cell Line embryonic stem cell
45 chr19:45629400-45635800 Weak transcription Thymus Thymus
46 chr19:45629400-45639800 Weak transcription Right Ventricle heart
47 chr19:45629400-45644000 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr19:45629600-45632000 Weak transcription Spleen Spleen
49 chr19:45629600-45639600 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr19:45629600-45640000 Weak transcription Placenta Placenta

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015