The 2.0 version of rSNPBase

Variant report

Variant rs28706378
Chromosome Location chr19:45643371-45643372
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:45610400-45644400 Weak transcription Aorta Aorta
2 chr19:45617000-45651600 Weak transcription Fetal Kidney kidney
3 chr19:45620800-45643800 Weak transcription Primary T regulatory cells fromperipheralblood blood
4 chr19:45621200-45644000 Weak transcription Primary monocytes fromperipheralblood blood
5 chr19:45621600-45643800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr19:45625000-45654200 Weak transcription NHDF-Ad bronchial
7 chr19:45626200-45644400 Weak transcription Ovary ovary
8 chr19:45626200-45653400 Weak transcription Primary hematopoietic stem cells blood
9 chr19:45627600-45655600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr19:45627800-45644000 Weak transcription Monocytes-CD14+_RO01746 blood
11 chr19:45629400-45644000 Weak transcription Primary T helper cells fromperipheralblood blood
12 chr19:45629600-45643800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr19:45629600-45644600 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr19:45629800-45643800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr19:45629800-45643800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr19:45629800-45644000 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr19:45630800-45653200 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr19:45632600-45643400 Weak transcription Primary T helper naive cells fromperipheralblood blood
19 chr19:45632600-45643600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr19:45633600-45655200 Weak transcription Primary T helper naive cells from peripheral blood blood
21 chr19:45634200-45644400 Weak transcription NHEK skin
22 chr19:45634200-45645000 Weak transcription HUVEC blood vessel
23 chr19:45634400-45653000 Weak transcription NH-A brain
24 chr19:45637400-45644000 Weak transcription Primary T cells fromperipheralblood blood
25 chr19:45637400-45644200 Weak transcription Primary T cells from cord blood blood
26 chr19:45638800-45652400 Weak transcription Small Intestine intestine
27 chr19:45639800-45656800 Weak transcription K562 blood
28 chr19:45640000-45644000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr19:45640000-45644800 Weak transcription A549 lung
30 chr19:45640000-45653800 Weak transcription ES-I3 Cell Line embryonic stem cell
31 chr19:45640000-45654400 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr19:45640200-45643800 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr19:45640200-45644400 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr19:45640200-45648200 Weak transcription Psoas Muscle Psoas
35 chr19:45640400-45643600 Weak transcription Pancreas Pancrea
36 chr19:45640400-45644200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr19:45640400-45655000 Weak transcription Fetal Heart heart
38 chr19:45640600-45644000 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr19:45640600-45644600 Weak transcription Liver Liver
40 chr19:45640600-45646000 Weak transcription Osteobl bone
41 chr19:45640800-45643600 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr19:45640800-45644000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr19:45640800-45644000 Weak transcription Adipose Nuclei Adipose
44 chr19:45640800-45644200 Weak transcription Muscle Satellite Cultured Cells --
45 chr19:45640800-45644200 Weak transcription NHLF lung
46 chr19:45640800-45645400 Weak transcription Colon Smooth Muscle Colon
47 chr19:45640800-45646000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr19:45641000-45644000 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr19:45641000-45644200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr19:45641000-45644200 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015