The 2.0 version of rSNPBase

Variant report

Variant rs58854055
Chromosome Location chr19:45685755-45685756
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:45682600-45686600 Weak transcription Fetal Kidney kidney
2 chr19:45683200-45688200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr19:45683200-45690400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr19:45683400-45688200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr19:45683400-45690600 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr19:45683400-45690800 Weak transcription H9 Cell Line embryonic stem cell
7 chr19:45683400-45693200 Weak transcription Aorta Aorta
8 chr19:45683600-45686200 Weak transcription Fetal Lung lung
9 chr19:45683800-45685800 Weak transcription NH-A brain
10 chr19:45683800-45686200 Weak transcription HSMM muscle
11 chr19:45683800-45686600 Weak transcription Brain Cingulate Gyrus brain
12 chr19:45684000-45687800 Weak transcription Fetal Brain Male brain
13 chr19:45684000-45688200 Weak transcription Primary hematopoietic stem cells blood
14 chr19:45684000-45690600 Weak transcription Dnd41 blood
15 chr19:45684000-45695200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr19:45684400-45685800 Strong transcription Brain Germinal Matrix brain
17 chr19:45684400-45686200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr19:45684400-45687800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr19:45684600-45685800 Strong transcription Fetal Stomach stomach
20 chr19:45684600-45686000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr19:45684600-45686000 Weak transcription HMEC breast
22 chr19:45684600-45688200 Weak transcription A549 lung
23 chr19:45684600-45690600 Weak transcription HUES6 Cell Line embryonic stem cell
24 chr19:45684800-45686200 Weak transcription Left Ventricle heart
25 chr19:45684800-45686200 Weak transcription Rectal Smooth Muscle rectum
26 chr19:45684800-45686400 Weak transcription Brain Anterior Caudate brain
27 chr19:45684800-45686800 Weak transcription NHLF lung
28 chr19:45684800-45687200 Weak transcription NHDF-Ad bronchial
29 chr19:45684800-45690400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr19:45684800-45690600 Weak transcription Stomach Mucosa stomach
31 chr19:45684800-45690800 Weak transcription Colonic Mucosa Colon
32 chr19:45684800-45690800 Weak transcription Fetal Brain Female brain
33 chr19:45684800-45691200 Weak transcription Right Atrium heart
34 chr19:45684800-45696000 Weak transcription Fetal Intestine Large intestine
35 chr19:45684800-45697600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr19:45684800-45701000 Weak transcription Placenta Amnion Placenta Amnion
37 chr19:45684800-45715000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr19:45685000-45686000 Weak transcription Primary neutrophils fromperipheralblood blood
39 chr19:45685000-45686000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr19:45685000-45686000 Weak transcription NHEK skin
41 chr19:45685000-45686200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
42 chr19:45685000-45686600 Weak transcription Brain Inferior Temporal Lobe brain
43 chr19:45685000-45687000 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr19:45685000-45687000 Strong transcription Fetal Intestine Small intestine
45 chr19:45685000-45687200 Weak transcription Spleen Spleen
46 chr19:45685000-45687400 Weak transcription Primary B cells from peripheral blood blood
47 chr19:45685000-45688200 Weak transcription Thymus Thymus
48 chr19:45685000-45688200 Weak transcription HepG2 liver
49 chr19:45685000-45688400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr19:45685000-45688600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015