The 2.0 version of rSNPBase

Variant report

Variant rs892133
Chromosome Location chr19:45634196-45634197
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:45608000-45639400 Weak transcription HUES64 Cell Line embryonic stem cell
2 chr19:45610400-45644400 Weak transcription Aorta Aorta
3 chr19:45617000-45651600 Weak transcription Fetal Kidney kidney
4 chr19:45617800-45640000 Weak transcription Fetal Lung lung
5 chr19:45618800-45639600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr19:45618800-45639600 Weak transcription Brain Substantia Nigra brain
7 chr19:45620800-45643800 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr19:45621200-45639800 Weak transcription Rectal Smooth Muscle rectum
9 chr19:45621200-45644000 Weak transcription Primary monocytes fromperipheralblood blood
10 chr19:45621400-45635000 Weak transcription Stomach Smooth Muscle stomach
11 chr19:45621600-45643800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr19:45621800-45639800 Weak transcription Colon Smooth Muscle Colon
13 chr19:45622000-45639200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr19:45622200-45639600 Weak transcription Fetal Brain Female brain
15 chr19:45625000-45654200 Weak transcription NHDF-Ad bronchial
16 chr19:45625600-45637000 Weak transcription Primary B cells from cord blood blood
17 chr19:45625800-45636800 Weak transcription Primary T cells from cord blood blood
18 chr19:45626200-45644400 Weak transcription Ovary ovary
19 chr19:45626200-45653400 Weak transcription Primary hematopoietic stem cells blood
20 chr19:45627000-45639200 Weak transcription Brain Germinal Matrix brain
21 chr19:45627200-45640000 Weak transcription Adipose Nuclei Adipose
22 chr19:45627600-45655600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr19:45627800-45644000 Weak transcription Monocytes-CD14+_RO01746 blood
24 chr19:45628000-45634200 Weak transcription Esophagus oesophagus
25 chr19:45629400-45635800 Weak transcription Thymus Thymus
26 chr19:45629400-45639800 Weak transcription Right Ventricle heart
27 chr19:45629400-45644000 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr19:45629600-45639600 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr19:45629600-45640000 Weak transcription Placenta Placenta
30 chr19:45629600-45640000 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr19:45629600-45643800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr19:45629600-45644600 Weak transcription Primary T helper cells PMA-I stimulated --
33 chr19:45629800-45635000 Weak transcription Duodenum Mucosa Duodenum
34 chr19:45629800-45636800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr19:45629800-45636800 Weak transcription Fetal Thymus thymus
36 chr19:45629800-45638000 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr19:45629800-45638600 Weak transcription Brain Cingulate Gyrus brain
38 chr19:45629800-45638800 Weak transcription Left Ventricle heart
39 chr19:45629800-45639600 Weak transcription Brain Hippocampus Middle brain
40 chr19:45629800-45639600 Weak transcription Stomach Mucosa stomach
41 chr19:45629800-45639800 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr19:45629800-45639800 Weak transcription Right Atrium heart
43 chr19:45629800-45643800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr19:45629800-45643800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr19:45629800-45644000 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr19:45630000-45638600 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr19:45630000-45639800 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr19:45630000-45641400 Weak transcription Placenta Amnion Placenta Amnion
49 chr19:45630200-45634200 Weak transcription GM12878-XiMat blood
50 chr19:45630200-45636800 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015