The 2.0 version of rSNPBase

Variant report

Variant rs60372869
Chromosome Location chr19:45544308-45544309
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:45542800-45544600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
2 chr19:45542800-45571200 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr19:45543000-45545600 Genic enhancers Spleen Spleen
4 chr19:45543200-45545200 Genic enhancers Esophagus oesophagus
5 chr19:45543200-45545200 Genic enhancers Lung lung
6 chr19:45543200-45545400 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood
7 chr19:45543200-45545400 Genic enhancers Left Ventricle heart
8 chr19:45543200-45545600 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
9 chr19:45543200-45545600 Genic enhancers Placenta Placenta
10 chr19:45543200-45546200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr19:45543400-45544600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr19:45543400-45544600 Enhancers Primary T killer naive cells fromperipheralblood blood
13 chr19:45543400-45544800 Genic enhancers Fetal Muscle Leg muscle
14 chr19:45543400-45545000 Genic enhancers Cortex derived primary cultured neurospheres brain
15 chr19:45543400-45545000 Genic enhancers Fetal Thymus thymus
16 chr19:45543400-45545200 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
17 chr19:45543400-45545200 Genic enhancers Primary T regulatory cells fromperipheralblood blood
18 chr19:45543400-45545200 Genic enhancers Fetal Adrenal Gland Adrenal Gland
19 chr19:45543400-45545200 Genic enhancers Fetal Muscle Trunk muscle
20 chr19:45543400-45545400 Genic enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr19:45543400-45545400 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
22 chr19:45543400-45545400 Genic enhancers Ovary ovary
23 chr19:45543400-45545400 Genic enhancers Pancreas Pancrea
24 chr19:45543400-45545600 Strong transcription ES-I3 Cell Line embryonic stem cell
25 chr19:45543400-45545600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
26 chr19:45543400-45545600 Genic enhancers Fetal Intestine Large intestine
27 chr19:45543400-45545600 Enhancers Stomach Mucosa stomach
28 chr19:45543400-45546200 Genic enhancers Primary T cells fromperipheralblood blood
29 chr19:45543400-45546200 Genic enhancers Right Ventricle heart
30 chr19:45543400-45550600 Strong transcription HUES64 Cell Line embryonic stem cell
31 chr19:45543600-45544600 Weak transcription HSMMtube muscle
32 chr19:45543600-45544800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr19:45543600-45545200 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr19:45543600-45545200 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr19:45543600-45545400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr19:45543600-45545400 Genic enhancers Primary T helper naive cells from peripheral blood blood
37 chr19:45543600-45545400 Genic enhancers Colonic Mucosa Colon
38 chr19:45543600-45545400 Strong transcription HSMM muscle
39 chr19:45543600-45545600 Strong transcription iPS-15b Cell Line embryonic stem cell
40 chr19:45543600-45545600 Genic enhancers Primary B cells from peripheral blood blood
41 chr19:45543600-45545600 Genic enhancers Primary T killer memory cells from peripheral blood blood
42 chr19:45543600-45546400 Genic enhancers Primary T helper cells PMA-I stimulated --
43 chr19:45543600-45546400 Genic enhancers Primary T helper cells fromperipheralblood blood
44 chr19:45543600-45548800 Weak transcription Pancreatic Islets Pancreatic Islet
45 chr19:45543600-45549400 Strong transcription Fetal Lung lung
46 chr19:45543600-45549600 Strong transcription HUES48 Cell Line embryonic stem cell
47 chr19:45543600-45549600 Strong transcription Placenta Amnion Placenta Amnion
48 chr19:45543600-45549800 Strong transcription H1 Cell Line embryonic stem cell
49 chr19:45543600-45550000 Strong transcription H9 Cell Line embryonic stem cell
50 chr19:45543600-45550000 Strong transcription Aorta Aorta

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Last update: Aug 31, 2015