The 2.0 version of rSNPBase

Variant report

Variant rs58880456
Chromosome Location chr19:45686830-45686831
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:45683200-45688200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr19:45683200-45690400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr19:45683400-45688200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr19:45683400-45690600 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr19:45683400-45690800 Weak transcription H9 Cell Line embryonic stem cell
6 chr19:45683400-45693200 Weak transcription Aorta Aorta
7 chr19:45684000-45687800 Weak transcription Fetal Brain Male brain
8 chr19:45684000-45688200 Weak transcription Primary hematopoietic stem cells blood
9 chr19:45684000-45690600 Weak transcription Dnd41 blood
10 chr19:45684000-45695200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr19:45684400-45687800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr19:45684600-45688200 Weak transcription A549 lung
13 chr19:45684600-45690600 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr19:45684800-45687200 Weak transcription NHDF-Ad bronchial
15 chr19:45684800-45690400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr19:45684800-45690600 Weak transcription Stomach Mucosa stomach
17 chr19:45684800-45690800 Weak transcription Colonic Mucosa Colon
18 chr19:45684800-45690800 Weak transcription Fetal Brain Female brain
19 chr19:45684800-45691200 Weak transcription Right Atrium heart
20 chr19:45684800-45696000 Weak transcription Fetal Intestine Large intestine
21 chr19:45684800-45697600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr19:45684800-45701000 Weak transcription Placenta Amnion Placenta Amnion
23 chr19:45684800-45715000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr19:45685000-45687000 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr19:45685000-45687000 Strong transcription Fetal Intestine Small intestine
26 chr19:45685000-45687200 Weak transcription Spleen Spleen
27 chr19:45685000-45687400 Weak transcription Primary B cells from peripheral blood blood
28 chr19:45685000-45688200 Weak transcription Thymus Thymus
29 chr19:45685000-45688200 Weak transcription HepG2 liver
30 chr19:45685000-45688400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr19:45685000-45688600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr19:45685000-45690000 Weak transcription Osteobl bone
33 chr19:45685000-45690200 Weak transcription Liver Liver
34 chr19:45685000-45690400 Weak transcription Pancreas Pancrea
35 chr19:45685000-45690600 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr19:45685000-45690800 Weak transcription Adipose Nuclei Adipose
37 chr19:45685000-45690800 Weak transcription Gastric stomach
38 chr19:45685000-45695000 Weak transcription Ovary ovary
39 chr19:45685000-45698600 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr19:45685000-45699000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr19:45685000-45704600 Weak transcription Esophagus oesophagus
42 chr19:45685000-45705600 Weak transcription Lung lung
43 chr19:45685000-45705800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr19:45685200-45687200 Weak transcription Primary B cells from cord blood blood
45 chr19:45685200-45687200 Weak transcription K562 blood
46 chr19:45685200-45687600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr19:45685200-45690600 Weak transcription Primary T cells from cord blood blood
48 chr19:45685200-45690600 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr19:45685200-45690600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
50 chr19:45685200-45690600 Weak transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015