The 2.0 version of rSNPBase

Variant report

Variant rs10425380
Chromosome Location chr19:45639988-45639989
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:45610400-45644400 Weak transcription Aorta Aorta
2 chr19:45617000-45651600 Weak transcription Fetal Kidney kidney
3 chr19:45617800-45640000 Weak transcription Fetal Lung lung
4 chr19:45620800-45643800 Weak transcription Primary T regulatory cells fromperipheralblood blood
5 chr19:45621200-45644000 Weak transcription Primary monocytes fromperipheralblood blood
6 chr19:45621600-45643800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr19:45625000-45654200 Weak transcription NHDF-Ad bronchial
8 chr19:45626200-45644400 Weak transcription Ovary ovary
9 chr19:45626200-45653400 Weak transcription Primary hematopoietic stem cells blood
10 chr19:45627200-45640000 Weak transcription Adipose Nuclei Adipose
11 chr19:45627600-45655600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr19:45627800-45644000 Weak transcription Monocytes-CD14+_RO01746 blood
13 chr19:45629400-45644000 Weak transcription Primary T helper cells fromperipheralblood blood
14 chr19:45629600-45640000 Weak transcription Placenta Placenta
15 chr19:45629600-45640000 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr19:45629600-45643800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr19:45629600-45644600 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr19:45629800-45643800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr19:45629800-45643800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr19:45629800-45644000 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr19:45630000-45641400 Weak transcription Placenta Amnion Placenta Amnion
22 chr19:45630800-45653200 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr19:45631800-45641400 Strong transcription Fetal Stomach stomach
24 chr19:45632600-45643000 Weak transcription H9 Cell Line embryonic stem cell
25 chr19:45632600-45643400 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr19:45632600-45643600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr19:45633600-45643000 Weak transcription Lung lung
28 chr19:45633600-45655200 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr19:45633800-45642800 Weak transcription Dnd41 blood
30 chr19:45634200-45641400 Strong transcription Fetal Intestine Small intestine
31 chr19:45634200-45644400 Weak transcription NHEK skin
32 chr19:45634200-45645000 Weak transcription HUVEC blood vessel
33 chr19:45634400-45640000 Weak transcription Muscle Satellite Cultured Cells --
34 chr19:45634400-45641200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr19:45634400-45641600 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr19:45634400-45653000 Weak transcription NH-A brain
37 chr19:45634600-45641400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
38 chr19:45634600-45641400 Weak transcription Esophagus oesophagus
39 chr19:45636600-45641800 Enhancers Primary B cells from peripheral blood blood
40 chr19:45637000-45641600 Enhancers Primary B cells from cord blood blood
41 chr19:45637200-45640600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr19:45637400-45640000 Weak transcription Fetal Heart heart
43 chr19:45637400-45640600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr19:45637400-45640600 Weak transcription Thymus Thymus
45 chr19:45637400-45644000 Weak transcription Primary T cells fromperipheralblood blood
46 chr19:45637400-45644200 Weak transcription Primary T cells from cord blood blood
47 chr19:45637600-45640000 Genic enhancers Fetal Muscle Trunk muscle
48 chr19:45638000-45642000 Enhancers Cortex derived primary cultured neurospheres brain
49 chr19:45638400-45640400 Enhancers Primary Natural Killer cells fromperipheralblood blood
50 chr19:45638600-45640600 Enhancers Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015