The 2.0 version of rSNPBase

Variant report

Variant rs28719739
Chromosome Location chr19:45650001-45650002
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:45617000-45651600 Weak transcription Fetal Kidney kidney
2 chr19:45625000-45654200 Weak transcription NHDF-Ad bronchial
3 chr19:45626200-45653400 Weak transcription Primary hematopoietic stem cells blood
4 chr19:45627600-45655600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr19:45630800-45653200 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr19:45633600-45655200 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr19:45634400-45653000 Weak transcription NH-A brain
8 chr19:45638800-45652400 Weak transcription Small Intestine intestine
9 chr19:45639800-45656800 Weak transcription K562 blood
10 chr19:45640000-45653800 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr19:45640000-45654400 Weak transcription iPS-18 Cell Line embryonic stem cell
12 chr19:45640400-45655000 Weak transcription Fetal Heart heart
13 chr19:45641400-45654600 Weak transcription HSMM muscle
14 chr19:45641600-45654000 Weak transcription HSMMtube muscle
15 chr19:45641800-45651200 Weak transcription Fetal Brain Male brain
16 chr19:45641800-45653800 Weak transcription Stomach Mucosa stomach
17 chr19:45642000-45652600 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr19:45642000-45653600 Strong transcription Fetal Intestine Small intestine
19 chr19:45642000-45655200 Weak transcription GM12878-XiMat blood
20 chr19:45642000-45655400 Weak transcription Right Atrium heart
21 chr19:45642400-45652600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
22 chr19:45642800-45650200 Strong transcription Spleen Spleen
23 chr19:45642800-45650800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr19:45642800-45650800 Strong transcription Placenta Placenta
25 chr19:45642800-45650800 Strong transcription Dnd41 blood
26 chr19:45642800-45651400 Strong transcription Colonic Mucosa Colon
27 chr19:45642800-45651600 Strong transcription Fetal Brain Female brain
28 chr19:45642800-45652000 Strong transcription Fetal Muscle Leg muscle
29 chr19:45642800-45652200 Strong transcription Fetal Intestine Large intestine
30 chr19:45642800-45652400 Strong transcription Thymus Thymus
31 chr19:45642800-45653000 Strong transcription Fetal Muscle Trunk muscle
32 chr19:45642800-45653400 Strong transcription Fetal Stomach stomach
33 chr19:45643000-45650400 Strong transcription Placenta Amnion Placenta Amnion
34 chr19:45643000-45653200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr19:45643000-45654200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr19:45643000-45654200 Strong transcription Gastric stomach
37 chr19:45643400-45650800 Strong transcription Primary T helper naive cells fromperipheralblood blood
38 chr19:45643400-45653600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr19:45643600-45651000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
40 chr19:45643600-45651600 Strong transcription Skeletal Muscle Male skeletal muscle
41 chr19:45643600-45653000 Strong transcription Pancreas Pancrea
42 chr19:45643600-45654000 Weak transcription HMEC breast
43 chr19:45643800-45650800 Strong transcription iPS-15b Cell Line embryonic stem cell
44 chr19:45643800-45650800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr19:45643800-45651000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr19:45643800-45652800 Strong transcription Right Ventricle heart
47 chr19:45643800-45653400 Strong transcription Cortex derived primary cultured neurospheres brain
48 chr19:45644000-45650200 Strong transcription Primary T helper cells fromperipheralblood blood
49 chr19:45644000-45650200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr19:45644000-45650200 Strong transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015