The 2.0 version of rSNPBase

Variant report

Variant rs2004356
Chromosome Location chr19:45619124-45619125
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:45603800-45619600 Weak transcription HSMMtube muscle
2 chr19:45606600-45623400 Weak transcription H9 Cell Line embryonic stem cell
3 chr19:45606600-45624800 Weak transcription NHEK skin
4 chr19:45606800-45621000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr19:45606800-45634000 Weak transcription iPS-20b Cell Line embryonic stem cell
6 chr19:45607200-45625600 Weak transcription NHLF lung
7 chr19:45607600-45626600 Weak transcription Fetal Brain Male brain
8 chr19:45607800-45620400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr19:45607800-45620600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr19:45608000-45619800 Weak transcription Brain Germinal Matrix brain
11 chr19:45608000-45620800 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr19:45608000-45639400 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr19:45608200-45619800 Weak transcription Adipose Nuclei Adipose
14 chr19:45608400-45629200 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr19:45608600-45619400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr19:45608600-45619600 Weak transcription Psoas Muscle Psoas
17 chr19:45608600-45621000 Weak transcription Fetal Brain Female brain
18 chr19:45608800-45619600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr19:45609000-45621400 Weak transcription Right Atrium heart
20 chr19:45609200-45619400 Weak transcription Brain Angular Gyrus brain
21 chr19:45609200-45620600 Weak transcription Brain Cingulate Gyrus brain
22 chr19:45609200-45620600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr19:45610400-45644400 Weak transcription Aorta Aorta
24 chr19:45611600-45619200 Weak transcription Thymus Thymus
25 chr19:45613200-45623600 Weak transcription Ovary ovary
26 chr19:45613400-45621800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr19:45614200-45623000 Enhancers Stomach Mucosa stomach
28 chr19:45614400-45619200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr19:45614400-45619400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr19:45614400-45619400 Weak transcription Left Ventricle heart
31 chr19:45614600-45619200 Weak transcription K562 blood
32 chr19:45614800-45619800 Genic enhancers Fetal Intestine Small intestine
33 chr19:45615000-45619200 Weak transcription Spleen Spleen
34 chr19:45615000-45619600 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr19:45615400-45619400 Enhancers Gastric stomach
36 chr19:45615600-45620200 Enhancers Lung lung
37 chr19:45615600-45629800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr19:45615800-45619600 Enhancers Esophagus oesophagus
39 chr19:45615800-45620600 Enhancers Primary T cells fromperipheralblood blood
40 chr19:45616000-45622000 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
41 chr19:45616000-45623200 Enhancers Pancreas Pancrea
42 chr19:45616200-45621000 Weak transcription Small Intestine intestine
43 chr19:45616400-45619400 Enhancers Skeletal Muscle Female skeletal muscle
44 chr19:45616400-45619400 Enhancers GM12878-XiMat blood
45 chr19:45616400-45620600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr19:45616400-45623400 Enhancers Fetal Muscle Leg muscle
47 chr19:45616800-45619400 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr19:45616800-45620800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr19:45617000-45619400 Weak transcription H1 Cell Line embryonic stem cell
50 chr19:45617000-45619400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015