Variant report

Variant	rs11188613
Chromosome Location	chr10:97868968-97868969
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:97856259..97858291-chr10:97868440..97871393,2	K562	blood:
2	chr10:97849405..97851373-chr10:97867555..97870050,2	K562	blood:

Variant related genes	Relation type
ENSG00000226688	Chromatin interaction

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs1047370	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10491070	1.00[CHB][hapmap]
rs10509700	1.00[CHB][hapmap];0.88[ASN][1000 genomes]
rs10509701	1.00[CHB][hapmap];0.88[ASN][1000 genomes]
rs10509703	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10786261	0.88[CEU][hapmap]
rs10786262	0.84[CEU][hapmap]
rs10882709	0.81[ASN][1000 genomes]
rs10882714	0.83[AMR][1000 genomes]
rs10882716	0.89[CEU][hapmap];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10882717	0.89[CEU][hapmap];0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10882718	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10882723	1.00[CHB][hapmap];0.88[ASN][1000 genomes]
rs10882728	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11188552	0.81[ASN][1000 genomes]
rs11188575	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11188579	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11188594	0.89[CEU][hapmap];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11188596	1.00[CHB][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11188601	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11188604	0.88[CEU][hapmap];1.00[CHB][hapmap];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11188606	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11188618	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11188622	1.00[CHB][hapmap];0.88[ASN][1000 genomes]
rs11188626	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11188627	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11188631	1.00[CHB][hapmap];0.88[ASN][1000 genomes]
rs11188632	0.88[ASN][1000 genomes]
rs11188635	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11188656	1.00[CEU][hapmap];1.00[CHB][hapmap];0.83[AFR][1000 genomes]
rs11593049	1.00[CHB][hapmap];0.88[ASN][1000 genomes]
rs11595809	1.00[CHB][hapmap];0.88[ASN][1000 genomes]
rs11597197	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11598546	1.00[CHB][hapmap];0.81[ASN][1000 genomes]
rs11598837	1.00[CHB][hapmap];0.88[ASN][1000 genomes]
rs11599170	1.00[CHB][hapmap]
rs11814327	1.00[CEU][hapmap]
rs12354644	1.00[CHB][hapmap];0.88[ASN][1000 genomes]
rs12354762	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12359842	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12761705	1.00[CHB][hapmap];0.88[ASN][1000 genomes]
rs1336455	0.84[CEU][hapmap];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2039616	0.83[CEU][hapmap];1.00[CHB][hapmap];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2125060	0.88[ASN][1000 genomes]
rs3961944	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61858613	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs713070	1.00[CEU][hapmap];1.00[CHB][hapmap];0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7896077	1.00[CHB][hapmap];0.88[ASN][1000 genomes]
rs7913418	0.84[CEU][hapmap];0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs915506	0.84[CEU][hapmap];0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97868000-97872200	Weak transcription	K562	blood

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