The 2.0 version of rSNPBase

Variant report

Variant rs16868699
Chromosome Location chr6:35215254-35215255
allele C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35191400-35226000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr6:35194000-35225600 Weak transcription Primary B cells from cord blood blood
3 chr6:35199400-35216200 Weak transcription Brain Substantia Nigra brain
4 chr6:35199600-35215600 Weak transcription Hela-S3 cervix
5 chr6:35199600-35226600 Weak transcription Esophagus oesophagus
6 chr6:35199800-35226200 Weak transcription Pancreas Pancrea
7 chr6:35200600-35225000 Weak transcription Fetal Brain Male brain
8 chr6:35201400-35226200 Weak transcription Stomach Mucosa stomach
9 chr6:35202600-35225800 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr6:35203400-35226000 Weak transcription HSMMtube muscle
11 chr6:35204400-35215400 Weak transcription GM12878-XiMat blood
12 chr6:35205600-35226000 Weak transcription HSMM muscle
13 chr6:35206000-35215400 Weak transcription K562 blood
14 chr6:35206600-35215600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr6:35206800-35216000 Strong transcription Osteobl bone
16 chr6:35207000-35215800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr6:35207400-35226200 Weak transcription Placenta Amnion Placenta Amnion
18 chr6:35207800-35224000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr6:35208000-35215800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr6:35208000-35216000 Weak transcription HUVEC blood vessel
21 chr6:35208200-35226000 Weak transcription Primary hematopoietic stem cells blood
22 chr6:35208400-35226000 Weak transcription NHEK skin
23 chr6:35208600-35220200 Strong transcription Fetal Stomach stomach
24 chr6:35209000-35216800 Weak transcription H9 Cell Line embryonic stem cell
25 chr6:35209000-35217400 Weak transcription Colonic Mucosa Colon
26 chr6:35209200-35216400 Weak transcription Brain Cingulate Gyrus brain
27 chr6:35209400-35216200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr6:35209400-35216200 Weak transcription Colon Smooth Muscle Colon
29 chr6:35209600-35216200 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr6:35209600-35216400 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr6:35209600-35216800 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr6:35209800-35216600 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr6:35209800-35220000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr6:35209800-35226400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr6:35210000-35217000 Weak transcription H1 Cell Line embryonic stem cell
36 chr6:35210200-35215600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr6:35210400-35219000 Weak transcription Placenta Placenta
38 chr6:35210600-35215600 Weak transcription Duodenum Mucosa Duodenum
39 chr6:35210600-35225400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr6:35211000-35226000 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr6:35212000-35216800 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr6:35212400-35226000 Weak transcription Primary B cells from peripheral blood blood
43 chr6:35212800-35216000 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr6:35213000-35215600 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr6:35213000-35215600 Weak transcription Fetal Heart heart
46 chr6:35213200-35216000 Weak transcription Brain Hippocampus Middle brain
47 chr6:35213200-35226200 Weak transcription Gastric stomach
48 chr6:35213400-35215600 Weak transcription Primary T regulatory cells fromperipheralblood blood
49 chr6:35213400-35216200 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr6:35213400-35216800 Weak transcription Ovary ovary

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Last update: Aug 31, 2015