The 2.0 version of rSNPBase

Variant report

Variant rs73409758
Chromosome Location chr6:35265217-35265218
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35248800-35265400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr6:35248800-35265800 Strong transcription Brain Inferior Temporal Lobe brain
3 chr6:35249000-35265400 Weak transcription Right Atrium heart
4 chr6:35249000-35266800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr6:35249200-35265400 Strong transcription Fetal Brain Female brain
6 chr6:35251000-35266800 Weak transcription Fetal Brain Male brain
7 chr6:35260800-35265600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr6:35261000-35265600 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr6:35261200-35270400 Weak transcription Hela-S3 cervix
10 chr6:35261600-35265600 Weak transcription H9 Cell Line embryonic stem cell
11 chr6:35261800-35265600 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr6:35261800-35265600 Weak transcription Small Intestine intestine
13 chr6:35263000-35265400 Genic enhancers Skeletal Muscle Female skeletal muscle
14 chr6:35263000-35265600 Weak transcription Fetal Kidney kidney
15 chr6:35263000-35270400 Weak transcription A549 lung
16 chr6:35263200-35265400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr6:35263200-35265600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr6:35263200-35270600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr6:35263200-35270600 Weak transcription NHDF-Ad bronchial
20 chr6:35263400-35265600 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr6:35263400-35265800 Weak transcription Brain Angular Gyrus brain
22 chr6:35263400-35270200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr6:35263600-35266000 Weak transcription Aorta Aorta
24 chr6:35263800-35265600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr6:35264000-35265400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr6:35264000-35265600 Enhancers Left Ventricle heart
27 chr6:35264000-35265600 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr6:35264200-35265600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr6:35264400-35265400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr6:35264400-35265400 Enhancers Primary B cells from cord blood blood
31 chr6:35264400-35265600 Enhancers HMEC breast
32 chr6:35264400-35266200 Weak transcription Ovary ovary
33 chr6:35264400-35267400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr6:35264600-35265400 Enhancers Fetal Thymus thymus
35 chr6:35264600-35265600 Weak transcription Brain Anterior Caudate brain
36 chr6:35264600-35265600 Weak transcription Brain Hippocampus Middle brain
37 chr6:35264600-35265600 Enhancers Lung lung
38 chr6:35264600-35265600 Enhancers Right Ventricle heart
39 chr6:35264600-35265800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr6:35264600-35270400 Weak transcription Muscle Satellite Cultured Cells --
41 chr6:35264800-35265400 Enhancers Primary T cells fromperipheralblood blood
42 chr6:35264800-35265400 Enhancers Primary Natural Killer cells fromperipheralblood blood
43 chr6:35264800-35265400 Enhancers Primary mononuclear cells fromperipheralblood Blood
44 chr6:35264800-35265400 Enhancers Colon Smooth Muscle Colon
45 chr6:35264800-35265400 Enhancers Duodenum Smooth Muscle Duodenum
46 chr6:35264800-35265400 Enhancers Esophagus oesophagus
47 chr6:35264800-35265400 Enhancers Skeletal Muscle Male skeletal muscle
48 chr6:35264800-35265400 Enhancers GM12878-XiMat blood
49 chr6:35264800-35265600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr6:35264800-35265600 Enhancers Gastric stomach

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Last update: Aug 31, 2015