The 2.0 version of rSNPBase

Variant report

Variant rs73411797
Chromosome Location chr6:35350469-35350470
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35329000-35350800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr6:35331200-35350800 Weak transcription H9 Cell Line embryonic stem cell
3 chr6:35338200-35356400 Weak transcription Pancreas Pancrea
4 chr6:35338400-35350800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr6:35338400-35378400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr6:35338600-35359400 Weak transcription Placenta Amnion Placenta Amnion
7 chr6:35338800-35350600 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr6:35338800-35353400 Weak transcription Fetal Muscle Trunk muscle
9 chr6:35339000-35351000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr6:35339200-35350600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr6:35339200-35353400 Weak transcription Left Ventricle heart
12 chr6:35339200-35353400 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr6:35339200-35356600 Weak transcription Esophagus oesophagus
14 chr6:35339400-35350800 Weak transcription Right Atrium heart
15 chr6:35339400-35353600 Weak transcription Small Intestine intestine
16 chr6:35339600-35350800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr6:35339600-35350800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr6:35339600-35350800 Weak transcription Colonic Mucosa Colon
19 chr6:35339600-35353400 Weak transcription HMEC breast
20 chr6:35339600-35353600 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr6:35339600-35357800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr6:35339800-35354800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr6:35340000-35350600 Weak transcription Fetal Intestine Large intestine
24 chr6:35340000-35357600 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr6:35340400-35350800 Weak transcription Spleen Spleen
26 chr6:35340600-35359400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr6:35341800-35354600 Weak transcription NHEK skin
28 chr6:35342000-35353400 Weak transcription Fetal Muscle Leg muscle
29 chr6:35344400-35358000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr6:35345000-35351000 Strong transcription Primary T cells from cord blood blood
31 chr6:35345200-35353600 Weak transcription Colon Smooth Muscle Colon
32 chr6:35345200-35355800 Weak transcription GM12878-XiMat blood
33 chr6:35345600-35350600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
34 chr6:35345600-35353400 Weak transcription Fetal Stomach stomach
35 chr6:35345600-35353400 Weak transcription HepG2 liver
36 chr6:35345600-35353600 Weak transcription Fetal Lung lung
37 chr6:35345600-35353800 Weak transcription Rectal Smooth Muscle rectum
38 chr6:35345600-35378400 Weak transcription Aorta Aorta
39 chr6:35345800-35353400 Weak transcription Ovary ovary
40 chr6:35346200-35359200 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr6:35346200-35359800 Weak transcription Stomach Smooth Muscle stomach
42 chr6:35346400-35353600 Weak transcription Brain Anterior Caudate brain
43 chr6:35346600-35350600 Strong transcription Primary B cells from peripheral blood blood
44 chr6:35346600-35350800 Weak transcription Primary T cells fromperipheralblood blood
45 chr6:35346600-35353400 Weak transcription Brain Hippocampus Middle brain
46 chr6:35346800-35353400 Weak transcription Brain Inferior Temporal Lobe brain
47 chr6:35347400-35357600 Weak transcription Primary T killer naive cells fromperipheralblood blood
48 chr6:35347600-35359200 Weak transcription Brain Angular Gyrus brain
49 chr6:35347600-35359200 Weak transcription Brain Substantia Nigra brain
50 chr6:35347800-35351200 Strong transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015