The 2.0 version of rSNPBase

Variant report

Variant rs73409778
Chromosome Location chr6:35277790-35277791
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35265200-35285600 Weak transcription Brain Substantia Nigra brain
2 chr6:35266600-35279800 Weak transcription Fetal Stomach stomach
3 chr6:35268600-35278600 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr6:35270600-35278200 Weak transcription Esophagus oesophagus
5 chr6:35271200-35278000 Weak transcription Right Atrium heart
6 chr6:35271400-35279800 Weak transcription Skeletal Muscle Female skeletal muscle
7 chr6:35271400-35285000 Weak transcription HepG2 liver
8 chr6:35271600-35278000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
9 chr6:35271600-35285200 Weak transcription Fetal Intestine Large intestine
10 chr6:35271600-35285600 Weak transcription Placenta Amnion Placenta Amnion
11 chr6:35271800-35278400 Genic enhancers Primary T cells fromperipheralblood blood
12 chr6:35272400-35277800 Genic enhancers Primary T regulatory cells fromperipheralblood blood
13 chr6:35272400-35278000 Weak transcription Duodenum Mucosa Duodenum
14 chr6:35272400-35278200 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr6:35272400-35279200 Weak transcription Adipose Nuclei Adipose
16 chr6:35272400-35284600 Weak transcription HMEC breast
17 chr6:35272400-35285400 Weak transcription Gastric stomach
18 chr6:35272600-35280200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr6:35273200-35277800 Genic enhancers Primary T helper cells fromperipheralblood blood
20 chr6:35273200-35278200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr6:35274400-35277800 Enhancers Primary T helper naive cells from peripheral blood blood
22 chr6:35274400-35277800 Genic enhancers Primary T helper naive cells fromperipheralblood blood
23 chr6:35274800-35278800 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
24 chr6:35275000-35279200 Enhancers Placenta Placenta
25 chr6:35275400-35278000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr6:35275600-35278400 Enhancers Primary T killer naive cells fromperipheralblood blood
27 chr6:35276000-35278000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
28 chr6:35276000-35293800 Weak transcription K562 blood
29 chr6:35276600-35277800 Enhancers Primary T killer memory cells from peripheral blood blood
30 chr6:35276600-35279200 Genic enhancers Primary hematopoietic stem cells short term culture blood
31 chr6:35276800-35278200 Genic enhancers Primary neutrophils fromperipheralblood blood
32 chr6:35276800-35278400 Genic enhancers Primary B cells from cord blood blood
33 chr6:35276800-35278600 Genic enhancers Rectal Mucosa Donor 29 rectum
34 chr6:35276800-35278800 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr6:35276800-35279000 Genic enhancers Thymus Thymus
36 chr6:35276800-35279200 Genic enhancers Primary B cells from peripheral blood blood
37 chr6:35276800-35279200 Genic enhancers Fetal Thymus thymus
38 chr6:35276800-35279800 Genic enhancers Dnd41 blood
39 chr6:35276800-35280600 Strong transcription Fetal Intestine Small intestine
40 chr6:35276800-35281000 Strong transcription NHEK skin
41 chr6:35277000-35279000 Weak transcription Lung lung
42 chr6:35277000-35281600 Strong transcription Breast Myoepithelial Primary Cells Breast
43 chr6:35277000-35285400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr6:35277200-35278200 Genic enhancers Primary T cells from cord blood blood
45 chr6:35277200-35278800 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
46 chr6:35277400-35277800 Genic enhancers Primary T cells effector/memory enriched fromperipheralblood blood
47 chr6:35277400-35278000 Genic enhancers Primary T helper cells PMA-I stimulated --
48 chr6:35277400-35278200 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr6:35277400-35278600 Strong transcription Pancreas Pancrea
50 chr6:35277400-35278800 Genic enhancers Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015