The 2.0 version of rSNPBase

Variant report

Variant rs6901580
Chromosome Location chr6:35243998-35243999
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35228400-35247800 Weak transcription Fetal Muscle Trunk muscle
2 chr6:35228400-35248000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr6:35228400-35250200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr6:35228600-35248400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr6:35228600-35248800 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr6:35228600-35253200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr6:35228800-35244000 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr6:35228800-35248800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr6:35228800-35248800 Weak transcription Spleen Spleen
10 chr6:35228800-35249000 Weak transcription Fetal Intestine Large intestine
11 chr6:35228800-35249000 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr6:35228800-35251400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr6:35229000-35248800 Weak transcription Duodenum Mucosa Duodenum
14 chr6:35229000-35248800 Weak transcription Thymus Thymus
15 chr6:35229000-35249000 Weak transcription Liver Liver
16 chr6:35229000-35250400 Weak transcription Fetal Brain Male brain
17 chr6:35229200-35246200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr6:35229200-35248800 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr6:35229200-35248800 Weak transcription Dnd41 blood
20 chr6:35229200-35250200 Weak transcription Pancreas Pancrea
21 chr6:35231200-35248400 Weak transcription Primary T cells fromperipheralblood blood
22 chr6:35232200-35248600 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr6:35232200-35248800 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr6:35232400-35248800 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr6:35232400-35250200 Weak transcription Primary hematopoietic stem cells blood
26 chr6:35232600-35248400 Weak transcription Fetal Lung lung
27 chr6:35232600-35265200 Weak transcription Stomach Mucosa stomach
28 chr6:35232800-35248800 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr6:35232800-35248800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
30 chr6:35232800-35249000 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr6:35233600-35248800 Weak transcription Primary B cells from cord blood blood
32 chr6:35233800-35258400 Weak transcription Small Intestine intestine
33 chr6:35235600-35246400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
34 chr6:35235600-35246400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr6:35236200-35248800 Weak transcription Primary B cells from peripheral blood blood
36 chr6:35236200-35248800 Weak transcription GM12878-XiMat blood
37 chr6:35236400-35249000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr6:35237600-35248600 Weak transcription Fetal Thymus thymus
39 chr6:35237800-35253400 Weak transcription Gastric stomach
40 chr6:35237800-35264800 Weak transcription K562 blood
41 chr6:35239000-35248800 Weak transcription Pancreatic Islets Pancreatic Islet
42 chr6:35239800-35246200 Weak transcription Primary T cells from cord blood blood
43 chr6:35240400-35248800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr6:35240600-35248600 Weak transcription Primary monocytes fromperipheralblood blood
45 chr6:35241600-35244200 Enhancers Skeletal Muscle Male skeletal muscle
46 chr6:35241800-35244000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr6:35242000-35244000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
48 chr6:35242000-35244400 Enhancers Left Ventricle heart
49 chr6:35242400-35248800 Weak transcription Primary T regulatory cells fromperipheralblood blood
50 chr6:35242400-35248800 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015