The 2.0 version of rSNPBase

Variant report

Variant rs73409769
Chromosome Location chr6:35268651-35268652
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35261200-35270400 Weak transcription Hela-S3 cervix
2 chr6:35263000-35270400 Weak transcription A549 lung
3 chr6:35263200-35270600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr6:35263200-35270600 Weak transcription NHDF-Ad bronchial
5 chr6:35263400-35270200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr6:35264600-35270400 Weak transcription Muscle Satellite Cultured Cells --
7 chr6:35264800-35269400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
8 chr6:35265000-35269200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr6:35265000-35269400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
10 chr6:35265200-35270200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr6:35265200-35270200 Weak transcription Osteobl bone
12 chr6:35265200-35270600 Weak transcription HSMM muscle
13 chr6:35265200-35285600 Weak transcription Brain Substantia Nigra brain
14 chr6:35265400-35268800 Active TSS Rectal Smooth Muscle rectum
15 chr6:35265400-35269000 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
16 chr6:35265400-35270400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr6:35265400-35272200 Weak transcription Fetal Brain Female brain
18 chr6:35265800-35269000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
19 chr6:35265800-35270400 Weak transcription Psoas Muscle Psoas
20 chr6:35266000-35269800 Weak transcription Lung lung
21 chr6:35266000-35270200 Weak transcription Right Atrium heart
22 chr6:35266000-35270200 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr6:35266000-35270400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr6:35266000-35270400 Weak transcription NH-A brain
25 chr6:35266000-35270800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr6:35266000-35271000 Weak transcription Left Ventricle heart
27 chr6:35266000-35271000 Weak transcription Right Ventricle heart
28 chr6:35266000-35272000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr6:35266200-35268800 Weak transcription Brain Anterior Caudate brain
30 chr6:35266200-35269200 Weak transcription Colon Smooth Muscle Colon
31 chr6:35266200-35269400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
32 chr6:35266200-35269400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
33 chr6:35266200-35270000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr6:35266200-35270400 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr6:35266200-35270400 Weak transcription Fetal Heart heart
36 chr6:35266200-35270600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr6:35266200-35270800 Weak transcription Skeletal Muscle Female skeletal muscle
38 chr6:35266400-35269200 Enhancers Breast Myoepithelial Primary Cells Breast
39 chr6:35266400-35269200 Transcr. at gene 5' and 3' Fetal Thymus thymus
40 chr6:35266400-35269200 Enhancers Stomach Mucosa stomach
41 chr6:35266400-35269400 Flanking Active TSS Primary T cells fromperipheralblood blood
42 chr6:35266400-35270200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr6:35266400-35270400 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr6:35266400-35270400 Weak transcription iPS-18 Cell Line embryonic stem cell
45 chr6:35266400-35270400 Flanking Active TSS Primary T cells from cord blood blood
46 chr6:35266400-35270600 Weak transcription HUES48 Cell Line embryonic stem cell
47 chr6:35266400-35270600 Weak transcription iPS-20b Cell Line embryonic stem cell
48 chr6:35266400-35270600 Weak transcription HUVEC blood vessel
49 chr6:35266600-35269200 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
50 chr6:35266600-35269400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015