The 2.0 version of rSNPBase

Variant report

Variant rs2187903
Chromosome Location chr6:35275382-35275383
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35265200-35285600 Weak transcription Brain Substantia Nigra brain
2 chr6:35266600-35279800 Weak transcription Fetal Stomach stomach
3 chr6:35266800-35277400 Weak transcription Pancreas Pancrea
4 chr6:35268600-35278600 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr6:35270600-35277400 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr6:35270600-35278200 Weak transcription Esophagus oesophagus
7 chr6:35271000-35277400 Weak transcription Spleen Spleen
8 chr6:35271200-35277200 Weak transcription NH-A brain
9 chr6:35271200-35277400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr6:35271200-35278000 Weak transcription Right Atrium heart
11 chr6:35271400-35277600 Weak transcription Colonic Mucosa Colon
12 chr6:35271400-35279800 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr6:35271400-35285000 Weak transcription HepG2 liver
14 chr6:35271600-35278000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
15 chr6:35271600-35285200 Weak transcription Fetal Intestine Large intestine
16 chr6:35271600-35285600 Weak transcription Placenta Amnion Placenta Amnion
17 chr6:35271800-35278400 Genic enhancers Primary T cells fromperipheralblood blood
18 chr6:35272200-35275800 Strong transcription Thymus Thymus
19 chr6:35272200-35276400 Strong transcription Fetal Thymus thymus
20 chr6:35272400-35275800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr6:35272400-35276800 Weak transcription NHEK skin
22 chr6:35272400-35277800 Genic enhancers Primary T regulatory cells fromperipheralblood blood
23 chr6:35272400-35278000 Weak transcription Duodenum Mucosa Duodenum
24 chr6:35272400-35278200 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr6:35272400-35279200 Weak transcription Adipose Nuclei Adipose
26 chr6:35272400-35284600 Weak transcription HMEC breast
27 chr6:35272400-35285400 Weak transcription Gastric stomach
28 chr6:35272600-35276800 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr6:35272600-35276800 Weak transcription GM12878-XiMat blood
30 chr6:35272600-35277000 Genic enhancers Primary T helper cells PMA-I stimulated --
31 chr6:35272600-35280200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr6:35272800-35276800 Weak transcription Dnd41 blood
33 chr6:35273000-35277600 Strong transcription Primary monocytes fromperipheralblood blood
34 chr6:35273200-35277800 Genic enhancers Primary T helper cells fromperipheralblood blood
35 chr6:35273200-35278200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr6:35273400-35275600 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
37 chr6:35273600-35276800 Weak transcription Fetal Intestine Small intestine
38 chr6:35273600-35277000 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr6:35273800-35276800 Strong transcription Primary B cells from peripheral blood blood
40 chr6:35274200-35275400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr6:35274200-35275600 Genic enhancers Primary T killer naive cells fromperipheralblood blood
42 chr6:35274200-35275800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr6:35274200-35277600 Strong transcription Monocytes-CD14+_RO01746 blood
44 chr6:35274400-35276000 Genic enhancers Primary T killer memory cells from peripheral blood blood
45 chr6:35274400-35276200 Strong transcription Primary neutrophils fromperipheralblood blood
46 chr6:35274400-35276200 Strong transcription Primary B cells from cord blood blood
47 chr6:35274400-35276800 Genic enhancers Primary T cells from cord blood blood
48 chr6:35274400-35277400 Strong transcription Primary hematopoietic stem cells blood
49 chr6:35274400-35277800 Enhancers Primary T helper naive cells from peripheral blood blood
50 chr6:35274400-35277800 Genic enhancers Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015