Variant report

Variant	rs2092263
Chromosome Location	chr6:146029687-146029688
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 275 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:274)

rs_ID	r²[population]
rs1004752	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1011596	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1011597	1.00[CEU][hapmap];0.81[JPT][hapmap];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10214925	0.92[EUR][1000 genomes]
rs10447449	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1045820	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1055212	0.94[EUR][1000 genomes]
rs1062067	0.85[CEU][hapmap];0.88[CHB][hapmap];0.91[JPT][hapmap]
rs1062068	0.88[CEU][hapmap]
rs1070516	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1070517	0.87[EUR][1000 genomes]
rs1070519	0.86[EUR][1000 genomes]
rs1070520	0.82[EUR][1000 genomes]
rs10872577	0.84[AMR][1000 genomes]
rs10872579	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10872580	0.96[CEU][hapmap];0.81[JPT][hapmap];0.89[EUR][1000 genomes]
rs11155438	0.96[CEU][hapmap];0.85[EUR][1000 genomes]
rs11155440	0.80[AFR][1000 genomes]
rs11155442	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1133832	0.88[CEU][hapmap];0.88[CHB][hapmap];0.91[JPT][hapmap]
rs11965018	0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12190966	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12199362	0.96[CEU][hapmap];0.81[JPT][hapmap];0.89[EUR][1000 genomes]
rs12205752	0.85[AMR][1000 genomes]
rs12211884	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1280275	0.85[AMR][1000 genomes]
rs1292333	1.00[CEU][hapmap];0.81[JPT][hapmap];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1292334	1.00[CEU][hapmap];0.81[JPT][hapmap];0.89[EUR][1000 genomes]
rs1292335	0.82[CEU][hapmap]
rs1292336	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1292337	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1292338	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1292339	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13214277	0.86[EUR][1000 genomes]
rs1337839	1.00[CEU][hapmap];0.88[CHB][hapmap];0.95[JPT][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1337840	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1337841	1.00[CEU][hapmap];0.81[JPT][hapmap];0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs13437042	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1415744	1.00[CEU][hapmap];0.81[JPT][hapmap];0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1415746	0.96[CEU][hapmap];0.81[JPT][hapmap];0.90[EUR][1000 genomes]
rs1415747	0.96[CEU][hapmap];0.81[JPT][hapmap];0.90[EUR][1000 genomes]
rs1569540	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1577916	0.92[EUR][1000 genomes]
rs1832362	0.93[CEU][hapmap];0.94[CHB][hapmap];0.90[JPT][hapmap];0.82[YRI][hapmap];0.86[EUR][1000 genomes]
rs1883365	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1890171	0.96[CEU][hapmap];0.81[JPT][hapmap];0.89[EUR][1000 genomes]
rs1935612	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs1935616	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1986729	0.83[EUR][1000 genomes]
rs2050027	1.00[CEU][hapmap];0.81[JPT][hapmap];0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2064185	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs2072911	0.84[AFR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2092262	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2092295	0.85[AMR][1000 genomes]
rs2092296	0.85[AMR][1000 genomes]
rs2092297	0.85[AMR][1000 genomes]
rs2103633	0.85[AMR][1000 genomes]
rs2142981	0.90[EUR][1000 genomes]
rs2142983	0.89[CEU][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2179323	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2235482	0.80[EUR][1000 genomes]
rs2243665	0.88[CEU][hapmap];0.88[CHB][hapmap];0.91[JPT][hapmap]
rs2246334	0.85[EUR][1000 genomes]
rs2247317	0.86[CEU][hapmap];0.89[CHB][hapmap];0.91[JPT][hapmap];0.81[YRI][hapmap]
rs2247666	0.88[CEU][hapmap]
rs2249147	0.86[EUR][1000 genomes]
rs2249386	0.96[CEU][hapmap];0.86[EUR][1000 genomes]
rs2250387	0.88[CEU][hapmap];0.88[CHB][hapmap];0.91[JPT][hapmap]
rs2253194	0.82[EUR][1000 genomes]
rs2253307	0.92[CEU][hapmap];0.94[CHB][hapmap];0.91[JPT][hapmap];0.82[EUR][1000 genomes]
rs2253648	0.89[CEU][hapmap];0.94[CHB][hapmap];0.95[JPT][hapmap]
rs2253654	0.93[CEU][hapmap]
rs2253764	0.93[CEU][hapmap];0.94[CHB][hapmap];0.91[JPT][hapmap];0.82[YRI][hapmap];0.80[EUR][1000 genomes]
rs2253768	0.93[CEU][hapmap];0.94[CHB][hapmap];0.95[JPT][hapmap];0.81[EUR][1000 genomes]
rs2253880	0.80[EUR][1000 genomes]
rs2254283	0.89[CEU][hapmap];0.89[CHB][hapmap];0.91[JPT][hapmap]
rs2254288	0.88[CEU][hapmap];0.88[CHB][hapmap];0.91[JPT][hapmap]
rs2256998	0.84[CEU][hapmap];0.88[CHB][hapmap];0.80[JPT][hapmap]
rs2265471	0.89[CEU][hapmap];0.89[CHB][hapmap];0.91[JPT][hapmap]
rs2265472	0.91[CEU][hapmap];0.94[CHB][hapmap];0.91[JPT][hapmap]
rs2265474	0.86[EUR][1000 genomes]
rs2265477	0.85[CEU][hapmap];0.88[CHB][hapmap];0.91[JPT][hapmap]
rs2265915	0.82[EUR][1000 genomes]
rs2265916	0.86[EUR][1000 genomes]
rs2265917	0.88[CEU][hapmap];0.88[CHB][hapmap];0.90[JPT][hapmap]
rs2265919	0.88[CEU][hapmap];0.88[CHB][hapmap];0.91[JPT][hapmap]
rs2328704	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2328707	0.93[EUR][1000 genomes]
rs2328709	0.89[EUR][1000 genomes]
rs2485632	0.84[EUR][1000 genomes]
rs2814879	0.80[EUR][1000 genomes]
rs2814880	0.87[CEU][hapmap];0.88[CHB][hapmap];0.89[JPT][hapmap]
rs35970782	0.86[AMR][1000 genomes]
rs371186	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs372904	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs378937	0.83[EUR][1000 genomes]
rs379040	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs3811102	0.96[CEU][hapmap];0.81[JPT][hapmap];0.89[EUR][1000 genomes]
rs409553	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs414297	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs418701	0.83[AMR][1000 genomes]
rs426874	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4332001	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs439035	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs441290	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4455694	0.95[EUR][1000 genomes]
rs446031	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs453834	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4634475	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4895683	1.00[CEU][hapmap];0.81[JPT][hapmap];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4895684	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4896820	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4896821	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4896824	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4896831	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.88[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs4896832	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs4896833	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4896837	0.96[CEU][hapmap];0.95[EUR][1000 genomes]
rs4896838	0.96[CEU][hapmap];0.95[EUR][1000 genomes]
rs4896839	0.95[EUR][1000 genomes]
rs4896841	0.94[EUR][1000 genomes]
rs4896842	0.93[EUR][1000 genomes]
rs4896843	0.93[EUR][1000 genomes]
rs4896844	0.90[EUR][1000 genomes]
rs55810423	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs57700188	0.98[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62433835	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62435810	0.85[EUR][1000 genomes]
rs62438257	0.94[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6570692	0.83[AMR][1000 genomes]
rs6570700	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6570701	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6570703	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6570705	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6570706	1.00[CHB][hapmap];0.95[JPT][hapmap];0.93[YRI][hapmap];0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6570708	0.96[CEU][hapmap];0.81[JPT][hapmap];0.85[EUR][1000 genomes]
rs6570713	0.90[EUR][1000 genomes]
rs6570715	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6570716	0.82[EUR][1000 genomes]
rs6570717	0.88[EUR][1000 genomes]
rs6570719	0.95[EUR][1000 genomes]
rs6570723	0.92[CEU][hapmap];0.89[CHB][hapmap];0.91[JPT][hapmap];0.82[YRI][hapmap];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6570724	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6570726	0.82[CEU][hapmap]
rs6899702	0.85[AMR][1000 genomes]
rs6899900	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6900040	0.85[AMR][1000 genomes]
rs6901888	0.96[CEU][hapmap];0.96[EUR][1000 genomes]
rs6902404	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6902410	0.83[AMR][1000 genomes]
rs6902913	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6903252	0.82[ASN][1000 genomes]
rs6906258	0.96[CEU][hapmap];0.90[EUR][1000 genomes]
rs6906402	0.96[CEU][hapmap];0.81[JPT][hapmap];0.90[EUR][1000 genomes]
rs6913727	0.85[AMR][1000 genomes]
rs6914203	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs6915718	0.96[CEU][hapmap];0.81[JPT][hapmap];0.90[EUR][1000 genomes]
rs6917135	0.93[CEU][hapmap];0.94[CHB][hapmap];0.91[JPT][hapmap];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6919684	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6921073	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6923074	0.85[AMR][1000 genomes]
rs6923678	0.94[EUR][1000 genomes]
rs6925594	0.85[AMR][1000 genomes]
rs6928007	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6930154	1.00[CEU][hapmap];0.81[JPT][hapmap];0.83[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6931553	0.88[EUR][1000 genomes]
rs6932863	0.87[EUR][1000 genomes]
rs6933161	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6937661	0.88[EUR][1000 genomes]
rs6941429	0.96[CEU][hapmap];0.81[JPT][hapmap];0.85[EUR][1000 genomes]
rs697053	0.96[CEU][hapmap];0.81[JPT][hapmap];0.85[EUR][1000 genomes]
rs697054	0.96[CEU][hapmap];0.81[JPT][hapmap];0.93[EUR][1000 genomes]
rs697055	0.96[CEU][hapmap];0.81[JPT][hapmap];0.94[EUR][1000 genomes]
rs697056	0.94[EUR][1000 genomes]
rs702304	0.96[CEU][hapmap];0.81[JPT][hapmap];0.86[EUR][1000 genomes]
rs702305	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs702306	0.96[CEU][hapmap];0.86[EUR][1000 genomes]
rs702307	0.96[CEU][hapmap];0.81[JPT][hapmap];0.87[EUR][1000 genomes]
rs702309	0.85[EUR][1000 genomes]
rs702314	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs702315	0.83[AMR][1000 genomes]
rs702317	0.95[EUR][1000 genomes]
rs702318	0.96[CEU][hapmap];0.95[EUR][1000 genomes]
rs702319	0.89[JPT][hapmap];0.95[EUR][1000 genomes]
rs702320	0.94[EUR][1000 genomes]
rs702321	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs702323	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs702324	0.96[CEU][hapmap];0.95[EUR][1000 genomes]
rs735535	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs735536	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7739735	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7742333	0.92[CEU][hapmap];0.94[CHB][hapmap];0.91[JPT][hapmap];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7744014	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7745696	0.93[CEU][hapmap];0.94[CHB][hapmap];0.91[JPT][hapmap];0.82[YRI][hapmap];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7752286	0.96[CEU][hapmap];0.81[JPT][hapmap];0.90[EUR][1000 genomes]
rs7753770	0.96[CEU][hapmap];0.81[JPT][hapmap];0.93[EUR][1000 genomes]
rs7756778	0.82[EUR][1000 genomes]
rs7762536	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7762562	0.93[CEU][hapmap];0.94[CHB][hapmap];0.91[JPT][hapmap];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7772286	0.81[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs7772717	0.85[EUR][1000 genomes]
rs7773939	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs857875	1.00[CEU][hapmap];0.81[JPT][hapmap];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs857877	1.00[CEU][hapmap];0.81[JPT][hapmap];0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs857879	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs857880	1.00[CEU][hapmap];0.81[JPT][hapmap];0.89[EUR][1000 genomes]
rs857881	0.96[CEU][hapmap];0.85[EUR][1000 genomes]
rs857882	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs857883	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs864148	0.84[EUR][1000 genomes]
rs870491	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9322028	0.83[AMR][1000 genomes]
rs9322029	0.83[AMR][1000 genomes]
rs9373463	0.85[AMR][1000 genomes]
rs9373464	0.83[AMR][1000 genomes]
rs9373471	0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9373473	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9373475	0.96[CEU][hapmap];0.81[JPT][hapmap];0.89[EUR][1000 genomes]
rs9373476	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9376954	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9376955	0.93[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.96[YRI][hapmap];0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9376956	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9376957	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9376961	1.00[CEU][hapmap];0.81[JPT][hapmap];0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs9376968	0.86[EUR][1000 genomes]
rs9386128	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9386131	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9386132	0.89[EUR][1000 genomes]
rs9386133	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9386134	0.88[EUR][1000 genomes]
rs9390336	0.85[AMR][1000 genomes]
rs9390338	0.83[AMR][1000 genomes]
rs9390343	0.93[CEU][hapmap];0.88[CHB][hapmap];0.95[JPT][hapmap];0.96[YRI][hapmap];0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9390344	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9390348	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9390349	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9390354	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9390355	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9390356	0.96[CEU][hapmap];0.81[JPT][hapmap];0.89[EUR][1000 genomes]
rs9390357	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9390358	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9399555	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9399559	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9399561	0.96[CEU][hapmap];0.81[JPT][hapmap];0.85[EUR][1000 genomes]
rs9399564	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9399565	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9399567	0.86[EUR][1000 genomes]
rs9403726	0.82[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs9403730	0.83[AMR][1000 genomes]
rs9403731	0.83[AMR][1000 genomes]
rs9403737	1.00[CEU][hapmap];0.81[JPT][hapmap];0.89[EUR][1000 genomes]
rs9403739	1.00[CEU][hapmap];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs9403741	1.00[CEU][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9403742	0.92[CEU][hapmap];0.90[JPT][hapmap];0.88[YRI][hapmap];0.83[AFR][1000 genomes];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9403746	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9403747	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9403749	0.92[CEU][hapmap];0.86[EUR][1000 genomes]
rs9403750	0.93[CEU][hapmap];0.94[CHB][hapmap];0.91[JPT][hapmap];0.82[YRI][hapmap];0.85[EUR][1000 genomes]
rs9485018	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9485019	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9485021	0.94[CHB][hapmap];1.00[JPT][hapmap];0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9485024	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[YRI][hapmap];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9497357	0.81[ASN][1000 genomes]
rs9497380	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9497395	1.00[CEU][hapmap];0.87[CHB][hapmap];0.95[JPT][hapmap];0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9497396	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9497398	0.87[EUR][1000 genomes]
rs9497401	0.94[EUR][1000 genomes]
rs9497406	0.93[EUR][1000 genomes]
rs9497419	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9497424	0.88[CEU][hapmap];0.88[CHB][hapmap];0.91[JPT][hapmap]
rs952405	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs952406	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs991507	0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv934064	chr6:146007547-146044233	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs2092263	RP11-545I5.3	cis	Esophagus Muscularis	GTEx

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:146003400-146033600	Weak transcription	Brain Hippocampus Middle	brain
2	chr6:146006800-146050000	Weak transcription	Brain Cingulate Gyrus	brain
3	chr6:146007400-146043800	Weak transcription	Liver	Liver
4	chr6:146020200-146035000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr6:146026800-146055800	Weak transcription	Left Ventricle	heart
6	chr6:146027000-146035800	Weak transcription	Thymus	Thymus
7	chr6:146027200-146034400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr6:146027400-146029800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr6:146027600-146043400	Weak transcription	Psoas Muscle	Psoas
10	chr6:146027800-146031400	Weak transcription	HSMMtube	muscle
11	chr6:146027800-146035000	Weak transcription	Skeletal Muscle Female	skeletal muscle
12	chr6:146028600-146049200	Weak transcription	Stomach Smooth Muscle	stomach
13	chr6:146028800-146035000	Weak transcription	Primary T cells from cord blood	blood
14	chr6:146029200-146029800	ZNF genes & repeats	Primary hematopoietic stem cells	blood
15	chr6:146029400-146029800	ZNF genes & repeats	Primary B cells from cord blood	blood
16	chr6:146029400-146030000	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr6:146029400-146030000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr6:146029400-146030000	ZNF genes & repeats	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr6:146029400-146030000	ZNF genes & repeats	Fetal Intestine Small	intestine
20	chr6:146029400-146030200	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
21	chr6:146029400-146030200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr6:146029600-146029800	ZNF genes & repeats	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr6:146029600-146029800	ZNF genes & repeats	Ovary	ovary
24	chr6:146029600-146029800	Enhancers	Right Ventricle	heart
25	chr6:146029600-146030000	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
26	chr6:146029600-146030000	ZNF genes & repeats	Aorta	Aorta
27	chr6:146029600-146030200	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
28	chr6:146029600-146030200	Strong transcription	Skeletal Muscle Male	skeletal muscle
29	chr6:146029600-146030800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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Variant report

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