Variant report

Variant	rs702324
Chromosome Location	chr6:146008793-146008794
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 343 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:342)

rs_ID	r²[population]
rs1004752	0.96[CEU][hapmap];0.95[EUR][1000 genomes]
rs1011596	0.96[CEU][hapmap];0.93[GIH][hapmap];0.91[TSI][hapmap];0.89[EUR][1000 genomes]
rs1011597	0.96[CEU][hapmap];0.85[CHB][hapmap];0.95[JPT][hapmap];0.89[EUR][1000 genomes]
rs10214925	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10447449	0.91[EUR][1000 genomes]
rs1045820	0.96[CEU][hapmap];0.93[GIH][hapmap];0.93[TSI][hapmap];0.86[EUR][1000 genomes]
rs1055212	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1062067	0.89[CEU][hapmap];0.80[MEX][hapmap];0.88[TSI][hapmap]
rs1062068	0.92[CEU][hapmap];0.83[GIH][hapmap];0.85[JPT][hapmap];0.80[MEX][hapmap];0.89[TSI][hapmap]
rs1070516	0.82[EUR][1000 genomes]
rs1070517	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1070518	0.90[ASN][1000 genomes]
rs1070519	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1070520	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10872577	0.82[EUR][1000 genomes]
rs10872579	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs10872580	1.00[CEU][hapmap];0.83[GIH][hapmap];0.95[JPT][hapmap];0.98[TSI][hapmap];0.91[EUR][1000 genomes]
rs11155433	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11155435	0.93[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11155438	1.00[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11155442	0.91[EUR][1000 genomes]
rs1133832	0.92[CEU][hapmap];0.91[TSI][hapmap]
rs11965018	0.93[EUR][1000 genomes]
rs12190966	0.90[EUR][1000 genomes]
rs12199362	1.00[CEU][hapmap];0.83[GIH][hapmap];0.95[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.91[EUR][1000 genomes]
rs12205752	0.82[EUR][1000 genomes]
rs12208019	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12208812	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12211884	0.82[EUR][1000 genomes]
rs1280275	0.83[EUR][1000 genomes]
rs1280276	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1280279	0.82[ASN][1000 genomes]
rs1292333	0.96[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];0.86[EUR][1000 genomes]
rs1292334	1.00[ASW][hapmap];0.96[CEU][hapmap];0.86[CHB][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.97[LWK][hapmap];0.87[MEX][hapmap];0.99[MKK][hapmap];0.93[TSI][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1292336	0.96[CEU][hapmap];0.86[EUR][1000 genomes]
rs1292337	0.96[CEU][hapmap];0.93[GIH][hapmap];0.93[TSI][hapmap];0.86[EUR][1000 genomes]
rs1292338	0.83[EUR][1000 genomes]
rs1292339	0.89[CEU][hapmap];0.83[GIH][hapmap];0.91[TSI][hapmap]
rs13214277	0.88[EUR][1000 genomes]
rs1337839	0.96[CEU][hapmap];0.81[JPT][hapmap];0.96[EUR][1000 genomes]
rs1337840	0.81[GIH][hapmap];0.91[TSI][hapmap];0.83[EUR][1000 genomes]
rs1337841	0.96[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];0.93[EUR][1000 genomes]
rs13437042	0.89[EUR][1000 genomes]
rs1415744	0.96[CEU][hapmap];0.86[CHB][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.93[TSI][hapmap];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1415746	0.87[ASW][hapmap];1.00[CEU][hapmap];0.86[CHB][hapmap];0.98[GIH][hapmap];0.95[JPT][hapmap];0.85[LWK][hapmap];0.94[MEX][hapmap];0.81[MKK][hapmap];0.98[TSI][hapmap];0.96[YRI][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1415747	0.87[ASW][hapmap];1.00[CEU][hapmap];0.86[CHB][hapmap];0.98[GIH][hapmap];0.95[JPT][hapmap];0.94[MEX][hapmap];0.81[MKK][hapmap];0.98[TSI][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1569540	0.91[EUR][1000 genomes]
rs1577916	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1832362	0.96[CEU][hapmap];0.88[EUR][1000 genomes]
rs1883365	0.96[CEU][hapmap];0.89[EUR][1000 genomes]
rs1890170	0.88[ASN][1000 genomes]
rs1890171	1.00[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];0.96[YRI][hapmap];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1912023	0.84[AMR][1000 genomes]
rs1935612	0.82[EUR][1000 genomes]
rs1935616	0.85[EUR][1000 genomes]
rs1970306	0.86[ASN][1000 genomes]
rs1986729	0.85[EUR][1000 genomes]
rs2050027	1.00[CEU][hapmap];0.95[JPT][hapmap];0.88[EUR][1000 genomes]
rs2064185	1.00[CEU][hapmap];0.84[CHB][hapmap];0.94[JPT][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2072911	0.87[EUR][1000 genomes]
rs2092262	0.85[EUR][1000 genomes]
rs2092263	0.96[CEU][hapmap];0.95[EUR][1000 genomes]
rs2092295	0.83[EUR][1000 genomes]
rs2092296	0.83[EUR][1000 genomes]
rs2092297	0.83[EUR][1000 genomes]
rs2096201	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2103633	0.83[EUR][1000 genomes]
rs2142978	0.92[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs2142980	0.92[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs2142981	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2142983	0.92[CEU][hapmap];0.91[EUR][1000 genomes]
rs2179323	0.86[EUR][1000 genomes]
rs2206142	0.90[ASN][1000 genomes]
rs2223411	0.94[ASN][1000 genomes]
rs2235481	0.92[CHB][hapmap];0.91[CHD][hapmap];0.95[JPT][hapmap];0.88[ASN][1000 genomes]
rs2235482	0.84[EUR][1000 genomes]
rs2243665	0.92[CEU][hapmap];0.89[TSI][hapmap]
rs2246132	0.83[ASN][1000 genomes]
rs2246334	0.87[EUR][1000 genomes]
rs2249147	0.88[EUR][1000 genomes]
rs2249386	1.00[CEU][hapmap];0.83[GIH][hapmap];0.85[JPT][hapmap];0.81[MEX][hapmap];0.95[TSI][hapmap];0.88[EUR][1000 genomes]
rs2250387	0.92[CEU][hapmap];0.81[MEX][hapmap];0.89[TSI][hapmap]
rs2253194	0.84[EUR][1000 genomes]
rs2253307	0.96[CEU][hapmap];0.81[GIH][hapmap];0.81[MEX][hapmap];0.95[TSI][hapmap];0.84[EUR][1000 genomes]
rs2253648	0.93[CEU][hapmap]
rs2253654	0.96[CEU][hapmap];0.85[JPT][hapmap];0.82[EUR][1000 genomes]
rs2253757	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs2253764	0.96[CEU][hapmap];0.82[EUR][1000 genomes]
rs2253768	0.96[CEU][hapmap];0.83[EUR][1000 genomes]
rs2253880	0.82[EUR][1000 genomes]
rs2253886	0.82[EUR][1000 genomes]
rs2254283	0.92[CEU][hapmap]
rs2254288	0.92[CEU][hapmap];0.91[TSI][hapmap]
rs2256998	0.88[CEU][hapmap];0.86[TSI][hapmap]
rs2265474	0.88[EUR][1000 genomes]
rs2265475	0.83[ASN][1000 genomes]
rs2265915	0.84[EUR][1000 genomes]
rs2265916	0.88[EUR][1000 genomes]
rs2328704	0.89[CEU][hapmap];0.86[EUR][1000 genomes]
rs2328707	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2328709	0.91[EUR][1000 genomes]
rs2485631	0.92[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs2485632	0.86[EUR][1000 genomes]
rs2814879	0.82[EUR][1000 genomes]
rs365747	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs365869	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs367065	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs370112	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs370654	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs371186	0.83[EUR][1000 genomes]
rs372904	0.83[EUR][1000 genomes]
rs376257	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs378937	0.80[EUR][1000 genomes]
rs379040	0.83[EUR][1000 genomes]
rs3811102	1.00[CEU][hapmap];0.95[JPT][hapmap];0.91[EUR][1000 genomes]
rs383841	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs385729	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs387376	0.84[AMR][1000 genomes]
rs392612	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs400329	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs401331	0.84[AMR][1000 genomes]
rs401561	0.84[AMR][1000 genomes]
rs405206	0.84[AMR][1000 genomes]
rs407887	0.82[AMR][1000 genomes]
rs408443	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs409553	0.83[EUR][1000 genomes]
rs411785	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs412350	0.82[AMR][1000 genomes]
rs414297	0.83[EUR][1000 genomes]
rs414600	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs418701	0.83[EUR][1000 genomes]
rs425999	0.84[AMR][1000 genomes]
rs426371	0.85[ASN][1000 genomes]
rs426874	0.83[EUR][1000 genomes]
rs427128	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4332001	0.82[EUR][1000 genomes]
rs4335004	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs434318	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs435671	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs436156	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs436498	0.80[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs437147	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs439035	0.83[EUR][1000 genomes]
rs4398765	0.88[ASN][1000 genomes]
rs440477	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs441290	0.83[EUR][1000 genomes]
rs443628	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4455694	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs446031	0.83[EUR][1000 genomes]
rs446362	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs448258	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs450921	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs451108	0.84[AMR][1000 genomes]
rs451699	0.84[AMR][1000 genomes]
rs453834	0.83[EUR][1000 genomes]
rs4634475	0.85[EUR][1000 genomes]
rs4895683	0.96[CEU][hapmap];0.95[JPT][hapmap];0.88[EUR][1000 genomes]
rs4895684	0.88[EUR][1000 genomes]
rs4896820	0.83[EUR][1000 genomes]
rs4896821	0.82[EUR][1000 genomes]
rs4896824	0.83[EUR][1000 genomes]
rs4896831	0.89[CEU][hapmap]
rs4896832	0.96[CEU][hapmap];0.85[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4896833	0.96[CEU][hapmap];0.86[EUR][1000 genomes]
rs4896837	1.00[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];0.96[YRI][hapmap];0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4896838	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4896839	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4896841	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4896842	0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4896843	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4896844	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs55810423	0.87[EUR][1000 genomes]
rs57700188	0.88[EUR][1000 genomes]
rs621382	0.82[AMR][1000 genomes]
rs62433835	0.85[EUR][1000 genomes]
rs62435775	0.86[ASN][1000 genomes]
rs62435810	0.87[EUR][1000 genomes]
rs6570692	0.82[EUR][1000 genomes]
rs6570700	0.83[EUR][1000 genomes]
rs6570701	0.96[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];0.86[EUR][1000 genomes]
rs6570703	0.95[CEU][hapmap];0.86[EUR][1000 genomes]
rs6570705	0.96[CEU][hapmap];0.93[GIH][hapmap];0.93[TSI][hapmap];0.86[EUR][1000 genomes]
rs6570706	0.86[EUR][1000 genomes]
rs6570708	1.00[CEU][hapmap];0.86[CHB][hapmap];0.98[GIH][hapmap];0.95[JPT][hapmap];0.84[LWK][hapmap];0.94[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6570713	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6570715	0.87[EUR][1000 genomes]
rs6570716	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6570717	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6570719	0.89[EUR][1000 genomes]
rs6570723	0.96[CEU][hapmap];0.88[EUR][1000 genomes]
rs6570724	0.88[EUR][1000 genomes]
rs6899702	0.82[EUR][1000 genomes]
rs6899900	0.83[EUR][1000 genomes]
rs6900040	0.83[EUR][1000 genomes]
rs6900175	0.84[CHB][hapmap];0.95[JPT][hapmap]
rs6901888	1.00[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6902404	0.82[EUR][1000 genomes]
rs6902410	0.82[EUR][1000 genomes]
rs6902913	0.88[EUR][1000 genomes]
rs6906258	1.00[CEU][hapmap];0.95[JPT][hapmap];0.83[YRI][hapmap];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6906402	1.00[CEU][hapmap];0.95[JPT][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6912079	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6913727	0.82[EUR][1000 genomes]
rs6914203	0.82[EUR][1000 genomes]
rs6915094	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6915718	0.93[ASW][hapmap];1.00[CEU][hapmap];0.83[GIH][hapmap];0.95[JPT][hapmap];0.87[LWK][hapmap];0.94[MEX][hapmap];0.93[MKK][hapmap];0.98[TSI][hapmap];0.83[YRI][hapmap];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6917135	0.96[CEU][hapmap];0.88[EUR][1000 genomes]
rs6919684	0.83[EUR][1000 genomes]
rs6921073	0.90[EUR][1000 genomes]
rs6923074	0.83[EUR][1000 genomes]
rs6923678	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6925594	0.82[EUR][1000 genomes]
rs6928007	0.89[EUR][1000 genomes]
rs6930154	0.96[CEU][hapmap];0.95[JPT][hapmap];0.94[EUR][1000 genomes]
rs6930181	0.82[CEU][hapmap]
rs6931553	0.90[EUR][1000 genomes]
rs6932863	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6933161	0.89[EUR][1000 genomes]
rs6937661	0.90[EUR][1000 genomes]
rs6941429	1.00[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs697053	0.87[ASW][hapmap];1.00[CEU][hapmap];0.86[CHB][hapmap];0.98[GIH][hapmap];0.95[JPT][hapmap];0.94[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs697054	0.87[ASW][hapmap];1.00[CEU][hapmap];0.86[CHB][hapmap];0.98[GIH][hapmap];0.95[JPT][hapmap];0.88[LWK][hapmap];0.94[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs697055	1.00[CEU][hapmap];0.86[CHB][hapmap];0.98[GIH][hapmap];0.95[JPT][hapmap];0.88[LWK][hapmap];0.94[MEX][hapmap];0.99[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs697056	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs702304	1.00[CEU][hapmap];0.86[CHB][hapmap];0.98[GIH][hapmap];0.95[JPT][hapmap];0.84[LWK][hapmap];0.94[MEX][hapmap];0.99[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs702305	0.86[EUR][1000 genomes]
rs702306	0.96[CEU][hapmap];0.85[CHB][hapmap];0.94[JPT][hapmap];0.95[YRI][hapmap];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs702307	1.00[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs702309	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs702314	0.95[EUR][1000 genomes]
rs702316	0.92[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs702317	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs702318	0.87[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];0.94[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs702319	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs702320	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs702321	0.96[EUR][1000 genomes]
rs702322	0.92[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs702323	0.96[EUR][1000 genomes]
rs735535	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs735536	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7739735	0.96[CEU][hapmap];0.91[TSI][hapmap];0.88[EUR][1000 genomes]
rs7742333	0.96[CEU][hapmap];0.81[GIH][hapmap];0.95[TSI][hapmap];0.87[EUR][1000 genomes]
rs7744014	0.96[CEU][hapmap];0.91[TSI][hapmap];0.88[EUR][1000 genomes]
rs7745696	0.96[CEU][hapmap];0.88[EUR][1000 genomes]
rs7746330	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7752286	1.00[CEU][hapmap];0.86[CHB][hapmap];0.98[GIH][hapmap];0.95[JPT][hapmap];0.82[LWK][hapmap];0.94[MEX][hapmap];0.99[MKK][hapmap];0.95[TSI][hapmap];0.88[YRI][hapmap];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7753273	0.92[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs7753770	1.00[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];0.92[YRI][hapmap];0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7753833	0.81[EUR][1000 genomes]
rs7755253	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7755586	0.89[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs7755887	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7756778	0.87[EUR][1000 genomes]
rs7762536	0.82[EUR][1000 genomes]
rs7762562	0.96[CEU][hapmap];0.88[EUR][1000 genomes]
rs7772717	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7773939	0.83[EUR][1000 genomes]
rs857875	0.96[CEU][hapmap];0.86[CHB][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.93[TSI][hapmap];0.86[EUR][1000 genomes]
rs857877	1.00[ASW][hapmap];0.96[CEU][hapmap];0.86[CHB][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.97[LWK][hapmap];0.87[MEX][hapmap];1.00[MKK][hapmap];0.93[TSI][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs857879	0.96[CEU][hapmap];0.86[EUR][1000 genomes]
rs857880	0.96[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];0.96[YRI][hapmap];0.86[EUR][1000 genomes]
rs857881	1.00[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs857882	0.96[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs857883	0.96[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs864148	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs870491	0.83[EUR][1000 genomes]
rs9322028	0.82[EUR][1000 genomes]
rs9322029	0.82[EUR][1000 genomes]
rs9373463	0.83[EUR][1000 genomes]
rs9373464	0.82[EUR][1000 genomes]
rs9373467	0.84[CHB][hapmap];0.95[JPT][hapmap];0.86[ASN][1000 genomes]
rs9373471	0.89[EUR][1000 genomes]
rs9373473	0.81[EUR][1000 genomes]
rs9373475	1.00[CEU][hapmap];0.83[GIH][hapmap];0.95[JPT][hapmap];0.86[MEX][hapmap];0.95[TSI][hapmap];0.91[EUR][1000 genomes]
rs9373476	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs9376945	0.84[AMR][1000 genomes]
rs9376950	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9376951	0.85[ASN][1000 genomes]
rs9376954	0.85[EUR][1000 genomes]
rs9376955	0.89[CEU][hapmap]
rs9376956	0.96[CEU][hapmap];0.86[EUR][1000 genomes]
rs9376957	0.96[CEU][hapmap];0.96[EUR][1000 genomes]
rs9376961	0.96[CEU][hapmap];0.86[CHB][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.91[TSI][hapmap];0.93[EUR][1000 genomes]
rs9376965	0.86[ASN][1000 genomes]
rs9376968	0.88[EUR][1000 genomes]
rs9386128	0.93[EUR][1000 genomes]
rs9386131	0.88[EUR][1000 genomes]
rs9386132	0.91[EUR][1000 genomes]
rs9386133	1.00[CEU][hapmap];0.81[GIH][hapmap];0.98[TSI][hapmap];0.91[EUR][1000 genomes]
rs9386134	0.90[EUR][1000 genomes]
rs9386136	0.92[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs9390336	0.82[EUR][1000 genomes]
rs9390338	0.82[EUR][1000 genomes]
rs9390343	0.89[CEU][hapmap];0.81[JPT][hapmap];0.84[EUR][1000 genomes]
rs9390344	0.88[CEU][hapmap];0.86[EUR][1000 genomes]
rs9390348	0.87[EUR][1000 genomes]
rs9390349	0.93[EUR][1000 genomes]
rs9390353	0.82[CEU][hapmap]
rs9390354	0.88[EUR][1000 genomes]
rs9390355	0.88[EUR][1000 genomes]
rs9390356	1.00[CEU][hapmap];0.83[GIH][hapmap];0.95[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.91[EUR][1000 genomes]
rs9390357	0.96[CEU][hapmap];0.91[TSI][hapmap];0.84[EUR][1000 genomes]
rs9390358	1.00[CEU][hapmap];0.81[GIH][hapmap];0.98[TSI][hapmap];0.90[EUR][1000 genomes]
rs9399553	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9399555	0.83[EUR][1000 genomes]
rs9399559	0.86[EUR][1000 genomes]
rs9399561	1.00[ASW][hapmap];1.00[CEU][hapmap];0.86[CHB][hapmap];0.98[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];0.94[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9399564	0.89[EUR][1000 genomes]
rs9399565	0.89[EUR][1000 genomes]
rs9399567	0.88[EUR][1000 genomes]
rs9403725	0.85[ASN][1000 genomes]
rs9403726	0.82[EUR][1000 genomes]
rs9403729	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9403730	0.82[EUR][1000 genomes]
rs9403731	0.82[EUR][1000 genomes]
rs9403734	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9403735	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9403737	0.96[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9403739	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.93[TSI][hapmap];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9403741	0.96[CEU][hapmap];0.95[EUR][1000 genomes]
rs9403742	0.89[CEU][hapmap];0.85[GIH][hapmap];0.85[JPT][hapmap];0.89[TSI][hapmap];0.83[EUR][1000 genomes]
rs9403746	0.89[EUR][1000 genomes]
rs9403747	0.89[CEU][hapmap];0.91[TSI][hapmap];0.88[EUR][1000 genomes]
rs9403749	0.96[CEU][hapmap];0.83[GIH][hapmap];0.85[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.88[EUR][1000 genomes]
rs9403750	0.96[CEU][hapmap];0.87[EUR][1000 genomes]
rs9485017	0.92[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs9485018	0.96[CEU][hapmap];0.94[EUR][1000 genomes]
rs9485019	0.92[EUR][1000 genomes]
rs9485021	0.91[EUR][1000 genomes]
rs9485024	1.00[CEU][hapmap];0.81[GIH][hapmap];0.98[TSI][hapmap];0.91[EUR][1000 genomes]
rs9497357	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9497380	0.96[CEU][hapmap];0.93[GIH][hapmap];0.93[TSI][hapmap];0.86[EUR][1000 genomes]
rs9497395	0.96[CEU][hapmap];0.93[GIH][hapmap];0.81[JPT][hapmap];0.93[TSI][hapmap];0.95[EUR][1000 genomes]
rs9497396	0.96[EUR][1000 genomes]
rs9497398	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9497401	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9497403	0.92[CHB][hapmap];0.92[CHD][hapmap];0.95[JPT][hapmap];0.89[ASN][1000 genomes]
rs9497406	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9497419	0.91[EUR][1000 genomes]
rs952405	0.82[EUR][1000 genomes]
rs952406	0.81[EUR][1000 genomes]
rs991507	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv934064	chr6:146007547-146044233	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs702324	RP11-545I5.3	cis	Esophagus Muscularis	GTEx
rs702324	SHPRH	cis	cerebellum	SCAN
rs702324	SHPRH	cis	parietal	SCAN

Chromatin state (count:44 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:145980600-146010800	Weak transcription	Right Ventricle	heart
2	chr6:145991200-146008800	Weak transcription	Brain Angular Gyrus	brain
3	chr6:145991800-146009200	Weak transcription	NHDF-Ad	bronchial
4	chr6:145995000-146010800	Weak transcription	Left Ventricle	heart
5	chr6:145995200-146013200	Weak transcription	Pancreas	Pancrea
6	chr6:145998800-146010800	Weak transcription	HSMMtube	muscle
7	chr6:145999000-146010800	Weak transcription	Psoas Muscle	Psoas
8	chr6:146000600-146010600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr6:146001600-146008800	Weak transcription	Rectal Mucosa Donor 29	rectum
10	chr6:146001800-146012200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
11	chr6:146002400-146009400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr6:146003200-146008800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
13	chr6:146003400-146009000	Weak transcription	Colon Smooth Muscle	Colon
14	chr6:146003400-146009400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr6:146003400-146010800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr6:146003400-146011600	Weak transcription	Brain Substantia Nigra	brain
17	chr6:146003400-146033600	Weak transcription	Brain Hippocampus Middle	brain
18	chr6:146003600-146009400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr6:146003600-146009600	Weak transcription	HUES64 Cell Line	embryonic stem cell
20	chr6:146003600-146009600	Weak transcription	Primary hematopoietic stem cells	blood
21	chr6:146003600-146010800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr6:146003600-146010800	Weak transcription	Aorta	Aorta
23	chr6:146003600-146020600	Weak transcription	Primary T helper cells fromperipheralblood	blood
24	chr6:146003600-146029400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
25	chr6:146003800-146009200	Weak transcription	Thymus	Thymus
26	chr6:146003800-146009800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr6:146003800-146012200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
28	chr6:146003800-146012400	Weak transcription	Sigmoid Colon	Sigmoid Colon
29	chr6:146003800-146026600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
30	chr6:146003800-146029600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
31	chr6:146003800-146029600	Weak transcription	Ovary	ovary
32	chr6:146004000-146009000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
33	chr6:146004000-146009400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
34	chr6:146006000-146009600	Weak transcription	Duodenum Smooth Muscle	Duodenum
35	chr6:146006800-146014800	Weak transcription	Adipose Nuclei	Adipose
36	chr6:146006800-146050000	Weak transcription	Brain Cingulate Gyrus	brain
37	chr6:146007000-146022400	Weak transcription	Primary B cells from cord blood	blood
38	chr6:146007400-146043800	Weak transcription	Liver	Liver
39	chr6:146007600-146011000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
40	chr6:146007800-146013600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
41	chr6:146008400-146009400	Weak transcription	Fetal Heart	heart
42	chr6:146008400-146009600	Weak transcription	Skeletal Muscle Female	skeletal muscle
43	chr6:146008400-146011200	Enhancers	Muscle Satellite Cultured Cells	--
44	chr6:146008600-146015600	Weak transcription	Skeletal Muscle Male	skeletal muscle

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Variant report

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