Variant report

Variant	rs697054
Chromosome Location	chr6:146003770-146003771
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 322 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:321)

rs_ID	r²[population]
rs1004752	0.96[CEU][hapmap];0.81[JPT][hapmap];0.93[EUR][1000 genomes]
rs1011596	0.96[CEU][hapmap];0.96[GIH][hapmap];0.81[JPT][hapmap];0.91[TSI][hapmap];0.87[EUR][1000 genomes]
rs1011597	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10214925	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10447449	0.90[EUR][1000 genomes]
rs1045820	0.96[CEU][hapmap];0.95[GIH][hapmap];0.81[JPT][hapmap];0.93[TSI][hapmap];0.87[EUR][1000 genomes]
rs1055212	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1070516	0.82[EUR][1000 genomes]
rs1070517	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1070519	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1070520	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10872577	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10872579	1.00[CEU][hapmap];0.81[JPT][hapmap];0.87[EUR][1000 genomes]
rs10872580	0.87[ASW][hapmap];1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.98[TSI][hapmap];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11155433	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11155435	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11155438	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11155442	0.90[EUR][1000 genomes]
rs11965018	0.91[EUR][1000 genomes]
rs12190966	0.89[EUR][1000 genomes]
rs12199362	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.95[TSI][hapmap];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12205752	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12208019	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12208812	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12211884	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1280275	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1280276	0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1292333	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1292334	0.87[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];0.94[MEX][hapmap];0.93[TSI][hapmap];0.96[YRI][hapmap];0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1292336	0.96[CEU][hapmap];0.81[JPT][hapmap];0.87[EUR][1000 genomes]
rs1292337	0.96[CEU][hapmap];0.96[GIH][hapmap];0.81[JPT][hapmap];0.93[TSI][hapmap];0.87[EUR][1000 genomes]
rs1292338	0.83[EUR][1000 genomes]
rs1292339	0.89[CEU][hapmap];0.85[GIH][hapmap];0.81[JPT][hapmap];0.91[TSI][hapmap]
rs13214277	0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1337839	0.96[CEU][hapmap];0.94[EUR][1000 genomes]
rs1337840	0.83[GIH][hapmap];0.81[JPT][hapmap];0.91[TSI][hapmap];0.82[EUR][1000 genomes]
rs1337841	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs13437042	0.87[EUR][1000 genomes]
rs1415744	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.93[TSI][hapmap];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1415746	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1415747	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];0.83[YRI][hapmap];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1569540	0.90[EUR][1000 genomes]
rs1577916	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1832362	0.96[CEU][hapmap];0.87[EUR][1000 genomes]
rs1883365	0.96[CEU][hapmap];0.81[JPT][hapmap];0.88[EUR][1000 genomes]
rs1890171	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1912023	0.83[AMR][1000 genomes]
rs1935612	0.83[EUR][1000 genomes]
rs1935616	0.86[EUR][1000 genomes]
rs1986729	0.83[EUR][1000 genomes]
rs2050027	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2064185	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2072911	0.85[EUR][1000 genomes]
rs2092262	0.84[EUR][1000 genomes]
rs2092263	0.96[CEU][hapmap];0.81[JPT][hapmap];0.93[EUR][1000 genomes]
rs2092295	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2092296	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2092297	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2096201	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2103633	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2142978	0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs2142980	0.95[JPT][hapmap]
rs2142981	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2142983	0.92[CEU][hapmap];0.90[EUR][1000 genomes]
rs2179323	0.87[EUR][1000 genomes]
rs2235481	0.89[JPT][hapmap]
rs2235482	0.83[EUR][1000 genomes]
rs2246334	0.86[EUR][1000 genomes]
rs2249147	0.87[EUR][1000 genomes]
rs2249386	1.00[CEU][hapmap];0.87[CHB][hapmap];0.90[CHD][hapmap];0.85[GIH][hapmap];0.90[JPT][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.86[EUR][1000 genomes]
rs2253194	0.82[EUR][1000 genomes]
rs2253307	0.96[CEU][hapmap];0.83[GIH][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.82[EUR][1000 genomes]
rs2253648	0.93[CEU][hapmap]
rs2253654	0.96[CEU][hapmap];0.87[CHB][hapmap];0.90[JPT][hapmap];0.80[EUR][1000 genomes]
rs2253757	0.95[JPT][hapmap]
rs2253764	0.96[CEU][hapmap];0.81[EUR][1000 genomes]
rs2253768	0.96[CEU][hapmap];0.81[EUR][1000 genomes]
rs2253880	0.81[EUR][1000 genomes]
rs2253886	0.80[EUR][1000 genomes]
rs2265474	0.86[EUR][1000 genomes]
rs2265915	0.83[EUR][1000 genomes]
rs2265916	0.87[EUR][1000 genomes]
rs2328704	0.89[CEU][hapmap];0.81[JPT][hapmap];0.85[EUR][1000 genomes]
rs2328707	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2328709	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2485631	0.95[JPT][hapmap]
rs2485632	0.84[EUR][1000 genomes]
rs2814879	0.81[EUR][1000 genomes]
rs35970782	0.82[ASN][1000 genomes]
rs365747	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs365869	0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs367065	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs370112	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs370654	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs371186	0.83[EUR][1000 genomes]
rs372904	0.84[EUR][1000 genomes]
rs376257	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs378937	0.81[EUR][1000 genomes]
rs379040	0.84[EUR][1000 genomes]
rs3811102	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs383841	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs385729	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs387376	0.83[AMR][1000 genomes]
rs392612	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs400329	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs401331	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs401561	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs405206	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs407887	0.80[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs408443	0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs409553	0.83[EUR][1000 genomes]
rs411785	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs412350	0.80[AMR][1000 genomes]
rs414297	0.84[EUR][1000 genomes]
rs414600	0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs418701	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs425999	0.83[AMR][1000 genomes]
rs426874	0.83[EUR][1000 genomes]
rs427128	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4332001	0.83[EUR][1000 genomes]
rs4335004	0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs434318	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs435671	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs436156	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs436498	0.88[AFR][1000 genomes];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs437147	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs439035	0.83[EUR][1000 genomes]
rs440477	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs441290	0.83[EUR][1000 genomes]
rs443628	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4455694	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs446031	0.83[EUR][1000 genomes]
rs446362	0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs448258	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs450921	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs451108	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs451699	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs453834	0.83[EUR][1000 genomes]
rs4634475	0.85[EUR][1000 genomes]
rs4895683	0.96[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4895684	0.87[EUR][1000 genomes]
rs4896820	0.83[EUR][1000 genomes]
rs4896821	0.82[EUR][1000 genomes]
rs4896824	0.83[EUR][1000 genomes]
rs4896829	0.87[ASN][1000 genomes]
rs4896831	0.89[CEU][hapmap];0.81[JPT][hapmap]
rs4896832	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4896833	0.96[CEU][hapmap];0.81[JPT][hapmap];0.87[EUR][1000 genomes]
rs4896837	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4896838	1.00[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];0.83[YRI][hapmap];0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4896839	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4896841	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4896842	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4896843	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4896844	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs55810423	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs57700188	0.87[EUR][1000 genomes]
rs621382	0.80[AMR][1000 genomes]
rs62433835	0.84[EUR][1000 genomes]
rs62435810	0.86[EUR][1000 genomes]
rs62438257	0.80[ASN][1000 genomes]
rs6570692	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6570700	0.83[EUR][1000 genomes]
rs6570701	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6570703	0.95[CEU][hapmap];0.80[JPT][hapmap];0.87[EUR][1000 genomes]
rs6570705	0.96[CEU][hapmap];0.96[GIH][hapmap];0.81[JPT][hapmap];0.93[TSI][hapmap];0.87[EUR][1000 genomes]
rs6570706	0.87[EUR][1000 genomes]
rs6570708	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.92[YRI][hapmap];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6570713	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6570715	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6570716	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6570717	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6570719	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6570723	0.96[CEU][hapmap];0.87[EUR][1000 genomes]
rs6570724	0.87[EUR][1000 genomes]
rs6899702	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6899900	0.83[EUR][1000 genomes]
rs6900040	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6900175	0.90[JPT][hapmap]
rs6901888	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6902404	0.82[EUR][1000 genomes]
rs6902410	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6902913	0.87[EUR][1000 genomes]
rs6906258	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6906402	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6912079	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6913727	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6914203	0.83[EUR][1000 genomes]
rs6915094	0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6915718	0.80[ASW][hapmap];1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.98[TSI][hapmap];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6917135	0.96[CEU][hapmap];0.87[EUR][1000 genomes]
rs6919684	0.83[EUR][1000 genomes]
rs6921073	0.89[EUR][1000 genomes]
rs6923074	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6923678	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6925594	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6928007	0.88[EUR][1000 genomes]
rs6930154	0.96[CEU][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6930181	0.82[CEU][hapmap]
rs6931553	0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6932863	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6933161	0.88[EUR][1000 genomes]
rs6937661	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6941429	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs697053	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs697055	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs697056	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs702304	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.92[YRI][hapmap];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs702305	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs702306	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs702307	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs702309	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs702314	0.95[EUR][1000 genomes]
rs702316	0.95[JPT][hapmap]
rs702317	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs702318	1.00[ASW][hapmap];1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs702319	0.83[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs702320	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs702321	0.94[EUR][1000 genomes]
rs702322	0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs702323	0.94[EUR][1000 genomes]
rs702324	0.87[ASW][hapmap];1.00[CEU][hapmap];0.86[CHB][hapmap];0.98[GIH][hapmap];0.95[JPT][hapmap];0.88[LWK][hapmap];0.94[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs735535	0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs735536	0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7739735	0.96[CEU][hapmap];0.81[GIH][hapmap];0.81[JPT][hapmap];0.91[TSI][hapmap];0.87[EUR][1000 genomes]
rs7742333	0.87[ASW][hapmap];0.96[CEU][hapmap];0.83[GIH][hapmap];0.83[MEX][hapmap];0.95[TSI][hapmap];0.86[EUR][1000 genomes]
rs7744014	0.96[CEU][hapmap];0.81[GIH][hapmap];0.81[JPT][hapmap];0.91[TSI][hapmap];0.87[EUR][1000 genomes]
rs7745696	0.96[CEU][hapmap];0.87[EUR][1000 genomes]
rs7746330	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7752286	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.84[YRI][hapmap];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7753273	0.95[JPT][hapmap]
rs7753770	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7755253	0.80[AFR][1000 genomes];0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7755586	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7755887	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7756778	0.86[EUR][1000 genomes]
rs7762536	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7762562	0.96[CEU][hapmap];0.87[EUR][1000 genomes]
rs7772717	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7773939	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs857875	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.93[TSI][hapmap];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs857877	0.87[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];0.94[MEX][hapmap];0.81[MKK][hapmap];0.93[TSI][hapmap];0.96[YRI][hapmap];0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs857879	0.96[CEU][hapmap];0.81[JPT][hapmap];0.87[EUR][1000 genomes]
rs857880	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs857881	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs857882	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs857883	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs864148	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs870491	0.83[EUR][1000 genomes]
rs9322028	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9322029	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9373463	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9373464	0.83[EUR][1000 genomes]
rs9373467	0.90[JPT][hapmap]
rs9373471	0.88[EUR][1000 genomes]
rs9373475	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.93[MEX][hapmap];0.95[TSI][hapmap];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9373476	1.00[CEU][hapmap];0.90[EUR][1000 genomes]
rs9376945	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs9376950	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9376954	0.86[EUR][1000 genomes]
rs9376955	0.89[CEU][hapmap]
rs9376956	0.96[CEU][hapmap];0.81[JPT][hapmap];0.86[EUR][1000 genomes]
rs9376957	0.96[CEU][hapmap];0.81[JPT][hapmap];0.94[EUR][1000 genomes]
rs9376961	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.91[TSI][hapmap];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9376968	0.87[EUR][1000 genomes]
rs9386128	0.91[EUR][1000 genomes]
rs9386131	0.87[EUR][1000 genomes]
rs9386132	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9386133	1.00[CEU][hapmap];0.83[GIH][hapmap];0.81[JPT][hapmap];0.98[TSI][hapmap];0.90[EUR][1000 genomes]
rs9386134	0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9386136	0.95[JPT][hapmap]
rs9390336	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9390338	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9390343	0.89[CEU][hapmap];0.82[EUR][1000 genomes]
rs9390344	0.88[CEU][hapmap];0.81[JPT][hapmap];0.85[EUR][1000 genomes]
rs9390348	0.85[EUR][1000 genomes]
rs9390349	0.91[EUR][1000 genomes]
rs9390353	0.82[CEU][hapmap];0.93[CHB][hapmap];0.85[JPT][hapmap]
rs9390354	0.87[EUR][1000 genomes]
rs9390355	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9390356	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.95[TSI][hapmap];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9390357	0.96[CEU][hapmap];0.81[GIH][hapmap];0.81[JPT][hapmap];0.91[TSI][hapmap];0.83[EUR][1000 genomes]
rs9390358	0.87[ASW][hapmap];1.00[CEU][hapmap];0.83[GIH][hapmap];0.81[JPT][hapmap];0.83[MEX][hapmap];0.98[TSI][hapmap];0.89[EUR][1000 genomes]
rs9399553	0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9399555	0.83[EUR][1000 genomes]
rs9399559	0.87[EUR][1000 genomes]
rs9399561	0.87[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9399564	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9399565	0.88[EUR][1000 genomes]
rs9399567	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9403726	0.83[EUR][1000 genomes]
rs9403729	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9403730	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9403731	0.83[EUR][1000 genomes]
rs9403734	0.83[AFR][1000 genomes];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9403735	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9403737	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9403739	0.96[CEU][hapmap];0.86[CHB][hapmap];0.98[GIH][hapmap];0.95[JPT][hapmap];0.93[TSI][hapmap];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9403741	0.96[CEU][hapmap];0.93[EUR][1000 genomes]
rs9403742	0.89[CEU][hapmap];0.93[CHB][hapmap];0.96[CHD][hapmap];0.87[GIH][hapmap];0.90[JPT][hapmap];0.89[TSI][hapmap];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9403746	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9403747	0.89[CEU][hapmap];0.82[GIH][hapmap];0.81[JPT][hapmap];0.91[TSI][hapmap];0.87[EUR][1000 genomes]
rs9403749	0.96[CEU][hapmap];0.87[CHB][hapmap];0.90[CHD][hapmap];0.85[GIH][hapmap];0.90[JPT][hapmap];0.94[MEX][hapmap];0.95[TSI][hapmap];0.86[EUR][1000 genomes]
rs9403750	0.96[CEU][hapmap];0.86[EUR][1000 genomes]
rs9485017	0.95[JPT][hapmap]
rs9485018	0.96[CEU][hapmap];0.81[JPT][hapmap];0.92[EUR][1000 genomes]
rs9485019	0.91[EUR][1000 genomes]
rs9485021	0.81[JPT][hapmap];0.89[EUR][1000 genomes]
rs9485024	1.00[CEU][hapmap];0.83[GIH][hapmap];0.81[JPT][hapmap];0.98[TSI][hapmap];0.90[EUR][1000 genomes]
rs9497357	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9497380	0.96[CEU][hapmap];0.96[GIH][hapmap];0.81[JPT][hapmap];0.93[TSI][hapmap];0.87[EUR][1000 genomes]
rs9497395	0.96[CEU][hapmap];0.96[GIH][hapmap];0.93[TSI][hapmap];0.94[EUR][1000 genomes]
rs9497396	0.94[EUR][1000 genomes]
rs9497398	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9497401	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9497403	0.89[JPT][hapmap]
rs9497406	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9497419	0.90[EUR][1000 genomes]
rs952405	0.83[EUR][1000 genomes]
rs952406	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs991507	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3323445	chr6:145999759-146003957	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs697054	SHPRH	cis	parietal	SCAN
rs697054	SHPRH	cis	cerebellum	SCAN
rs697054	RP11-545I5.3	cis	Esophagus Muscularis	GTEx

Chromatin state (count:74 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:145980600-146010800	Weak transcription	Right Ventricle	heart
2	chr6:145986600-146006400	Weak transcription	Brain Cingulate Gyrus	brain
3	chr6:145990600-146004400	Weak transcription	Rectal Smooth Muscle	rectum
4	chr6:145991200-146008800	Weak transcription	Brain Angular Gyrus	brain
5	chr6:145991800-146009200	Weak transcription	NHDF-Ad	bronchial
6	chr6:145994600-146007000	Weak transcription	Brain Inferior Temporal Lobe	brain
7	chr6:145994800-146008400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr6:145995000-146010800	Weak transcription	Left Ventricle	heart
9	chr6:145995200-146004000	Weak transcription	Fetal Stomach	stomach
10	chr6:145995200-146006400	Weak transcription	Lung	lung
11	chr6:145995200-146013200	Weak transcription	Pancreas	Pancrea
12	chr6:145998800-146010800	Weak transcription	HSMMtube	muscle
13	chr6:145999000-146010800	Weak transcription	Psoas Muscle	Psoas
14	chr6:145999600-146008600	Weak transcription	Fetal Intestine Large	intestine
15	chr6:146000600-146010600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr6:146001600-146006400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
17	chr6:146001600-146008800	Weak transcription	Rectal Mucosa Donor 29	rectum
18	chr6:146001800-146006400	Weak transcription	Fetal Lung	lung
19	chr6:146001800-146012200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
20	chr6:146002200-146007800	Weak transcription	Primary T cells fromperipheralblood	blood
21	chr6:146002400-146009400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr6:146002800-146003800	ZNF genes & repeats	Primary B cells from cord blood	blood
23	chr6:146002800-146003800	Strong transcription	Primary T cells from cord blood	blood
24	chr6:146002800-146003800	ZNF genes & repeats	Primary T killer naive cells fromperipheralblood	blood
25	chr6:146002800-146003800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr6:146002800-146003800	Strong transcription	Brain Anterior Caudate	brain
27	chr6:146002800-146003800	Strong transcription	Ovary	ovary
28	chr6:146002800-146003800	Strong transcription	Skeletal Muscle Male	skeletal muscle
29	chr6:146002800-146004000	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr6:146002800-146005000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr6:146002800-146007400	Strong transcription	Liver	Liver
32	chr6:146003000-146003800	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
33	chr6:146003000-146003800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
34	chr6:146003000-146003800	ZNF genes & repeats	Primary monocytes fromperipheralblood	blood
35	chr6:146003000-146003800	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
36	chr6:146003000-146003800	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
37	chr6:146003000-146003800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
38	chr6:146003000-146003800	Strong transcription	Thymus	Thymus
39	chr6:146003000-146004600	Strong transcription	Skeletal Muscle Female	skeletal muscle
40	chr6:146003000-146005000	Strong transcription	Primary B cells from peripheral blood	blood
41	chr6:146003000-146005000	Strong transcription	Stomach Smooth Muscle	stomach
42	chr6:146003000-146006800	Strong transcription	Adipose Nuclei	Adipose
43	chr6:146003200-146003800	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
44	chr6:146003200-146003800	ZNF genes & repeats	H9 Cell Line	embryonic stem cell
45	chr6:146003200-146003800	Strong transcription	Sigmoid Colon	Sigmoid Colon
46	chr6:146003200-146008200	Weak transcription	Primary T helper cells PMA-I stimulated	--
47	chr6:146003200-146008800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
48	chr6:146003400-146003800	Weak transcription	Rectal Mucosa Donor 31	rectum
49	chr6:146003400-146006400	Weak transcription	Brain Germinal Matrix	brain
50	chr6:146003400-146007800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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