The 2.0 version of rSNPBase

Variant report

Variant rs365825
Chromosome Location chr17:43705601-43705602
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43697800-43705800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr17:43697800-43706800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr17:43697800-43707400 Weak transcription Brain Substantia Nigra brain
4 chr17:43698200-43706800 Weak transcription Liver Liver
5 chr17:43698200-43706800 Weak transcription Colonic Mucosa Colon
6 chr17:43698200-43706800 Weak transcription Duodenum Mucosa Duodenum
7 chr17:43698200-43706800 Weak transcription Lung lung
8 chr17:43698200-43706800 Weak transcription A549 lung
9 chr17:43698200-43707000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr17:43698200-43707000 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr17:43698200-43707000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr17:43698200-43707000 Weak transcription Brain Cingulate Gyrus brain
13 chr17:43698200-43707000 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr17:43698200-43707000 Weak transcription Small Intestine intestine
15 chr17:43698200-43707000 Weak transcription Spleen Spleen
16 chr17:43698200-43707200 Weak transcription Primary B cells from cord blood blood
17 chr17:43698200-43707200 Weak transcription Rectal Smooth Muscle rectum
18 chr17:43698200-43707200 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr17:43698200-43707200 Weak transcription Hela-S3 cervix
20 chr17:43698200-43707200 Weak transcription HUVEC blood vessel
21 chr17:43698200-43707400 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr17:43698200-43712600 Weak transcription NH-A brain
23 chr17:43698200-43719000 Weak transcription K562 blood
24 chr17:43698400-43706800 Weak transcription HepG2 liver
25 chr17:43698400-43707000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr17:43698400-43707000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr17:43698400-43707000 Weak transcription Gastric stomach
28 chr17:43698400-43707000 Weak transcription Ovary ovary
29 chr17:43698400-43707000 Weak transcription Thymus Thymus
30 chr17:43698400-43707200 Weak transcription Esophagus oesophagus
31 chr17:43698400-43707200 Weak transcription Left Ventricle heart
32 chr17:43698400-43707200 Weak transcription Right Ventricle heart
33 chr17:43698400-43707400 Weak transcription Primary hematopoietic stem cells blood
34 chr17:43698400-43707400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr17:43698800-43706800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr17:43698800-43706800 Weak transcription Brain Inferior Temporal Lobe brain
37 chr17:43698800-43706800 Weak transcription GM12878-XiMat blood
38 chr17:43698800-43707000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr17:43698800-43707000 Weak transcription H9 Cell Line embryonic stem cell
40 chr17:43698800-43707000 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr17:43698800-43707000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr17:43698800-43707000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr17:43698800-43707000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr17:43698800-43707000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr17:43698800-43707000 Weak transcription Colon Smooth Muscle Colon
46 chr17:43698800-43707000 Weak transcription HSMMtube muscle
47 chr17:43698800-43707200 Weak transcription ES-I3 Cell Line embryonic stem cell
48 chr17:43698800-43707200 Weak transcription HMEC breast
49 chr17:43698800-43707200 Weak transcription HSMM muscle
50 chr17:43698800-43707200 Weak transcription Osteobl bone

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Last update: Aug 31, 2015