The 2.0 version of rSNPBase

Variant report

Variant rs56192752
Chromosome Location chr17:43555253-43555254
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43510800-43567200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr17:43519600-43564600 Weak transcription HSMMtube muscle
3 chr17:43523000-43567200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr17:43523800-43560000 Weak transcription NHDF-Ad bronchial
5 chr17:43524400-43567000 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr17:43527600-43556800 Weak transcription Fetal Lung lung
7 chr17:43529000-43560000 Weak transcription Primary hematopoietic stem cells blood
8 chr17:43529000-43566600 Weak transcription Colon Smooth Muscle Colon
9 chr17:43534000-43559000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr17:43539800-43564800 Weak transcription HSMM muscle
11 chr17:43540200-43566600 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr17:43540200-43567200 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr17:43540200-43567200 Weak transcription GM12878-XiMat blood
14 chr17:43540800-43556000 Strong transcription Monocytes-CD14+_RO01746 blood
15 chr17:43546600-43559200 Weak transcription Ovary ovary
16 chr17:43546600-43565000 Weak transcription Brain Cingulate Gyrus brain
17 chr17:43546800-43560000 Weak transcription Stomach Mucosa stomach
18 chr17:43546800-43567200 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr17:43547200-43560200 Weak transcription HMEC breast
20 chr17:43547400-43560600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr17:43548200-43561800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr17:43548200-43567600 Weak transcription Small Intestine intestine
23 chr17:43548400-43566600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr17:43548400-43567400 Weak transcription Psoas Muscle Psoas
25 chr17:43549400-43556400 Strong transcription Primary neutrophils fromperipheralblood blood
26 chr17:43549600-43555600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr17:43549600-43555600 Strong transcription Fetal Stomach stomach
28 chr17:43549600-43555600 Strong transcription Stomach Smooth Muscle stomach
29 chr17:43549600-43556200 Strong transcription Primary monocytes fromperipheralblood blood
30 chr17:43549600-43556200 Strong transcription Liver Liver
31 chr17:43549800-43555600 Strong transcription Fetal Intestine Small intestine
32 chr17:43549800-43555800 Strong transcription Primary T helper cells PMA-I stimulated --
33 chr17:43550000-43557400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr17:43550200-43560000 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr17:43550200-43564600 Weak transcription Primary B cells from cord blood blood
36 chr17:43550400-43560400 Weak transcription HUVEC blood vessel
37 chr17:43550400-43565000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr17:43551400-43555400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr17:43551600-43555400 Strong transcription Fetal Adrenal Gland Adrenal Gland
40 chr17:43551600-43555600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr17:43551600-43555600 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr17:43551600-43555600 Strong transcription Thymus Thymus
43 chr17:43551600-43556200 Strong transcription Dnd41 blood
44 chr17:43551800-43555600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr17:43551800-43555800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
46 chr17:43551800-43555800 Strong transcription Fetal Thymus thymus
47 chr17:43551800-43556000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr17:43551800-43556200 Strong transcription Duodenum Mucosa Duodenum
49 chr17:43552000-43555600 Strong transcription Esophagus oesophagus
50 chr17:43552200-43555600 Strong transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015