Variant report

Variant rs62064637
Chromosome Location chr17:43485551-43485552
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43472600-43485600 Weak transcription HSMMtube muscle
2 chr17:43472800-43487400 Weak transcription HUVEC blood vessel
3 chr17:43475800-43490400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr17:43479400-43489600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr17:43482200-43486400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr17:43482200-43486800 Weak transcription Liver Liver
7 chr17:43482200-43487200 Weak transcription Brain Inferior Temporal Lobe brain
8 chr17:43482400-43485600 Weak transcription Brain Angular Gyrus brain
9 chr17:43482400-43486400 Weak transcription Brain Anterior Caudate brain
10 chr17:43482400-43486600 Weak transcription Brain Cingulate Gyrus brain
11 chr17:43482400-43486600 Weak transcription NHEK skin
12 chr17:43482400-43487000 Weak transcription Pancreas Pancrea
13 chr17:43482400-43501600 Weak transcription HMEC breast
14 chr17:43482600-43486600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr17:43482800-43486200 Weak transcription K562 blood
16 chr17:43483200-43485600 Enhancers Primary hematopoietic stem cells blood
17 chr17:43483200-43485600 Weak transcription Placenta Amnion Placenta Amnion
18 chr17:43483200-43496000 Weak transcription Hela-S3 cervix
19 chr17:43483400-43485600 Genic enhancers Primary T helper cells fromperipheralblood blood
20 chr17:43483400-43485600 Weak transcription Right Ventricle heart
21 chr17:43483400-43485800 Weak transcription Esophagus oesophagus
22 chr17:43483400-43486200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr17:43483400-43486600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr17:43483400-43487000 Weak transcription Colon Smooth Muscle Colon
25 chr17:43483400-43487200 Enhancers Stomach Mucosa stomach
26 chr17:43483400-43488800 Weak transcription Psoas Muscle Psoas
27 chr17:43483600-43485600 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr17:43483600-43485600 Genic enhancers Fetal Thymus thymus
29 chr17:43483600-43485800 Weak transcription Brain Substantia Nigra brain
30 chr17:43483800-43485600 Enhancers Colonic Mucosa Colon
31 chr17:43483800-43485600 Weak transcription Fetal Heart heart
32 chr17:43483800-43485800 Enhancers Primary T helper naive cells from peripheral blood blood
33 chr17:43483800-43485800 Weak transcription Rectal Smooth Muscle rectum
34 chr17:43483800-43486000 Weak transcription Gastric stomach
35 chr17:43483800-43487600 Weak transcription ES-WA7 Cell Line embryonic stem cell
36 chr17:43483800-43488800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
37 chr17:43484000-43485600 Enhancers Primary T helper cells PMA-I stimulated --
38 chr17:43484000-43485600 Enhancers Primary T killer naive cells fromperipheralblood blood
39 chr17:43484000-43485800 Enhancers Spleen Spleen
40 chr17:43484000-43487400 Genic enhancers Fetal Intestine Small intestine
41 chr17:43484200-43485600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
42 chr17:43484200-43485600 Enhancers Rectal Mucosa Donor 31 rectum
43 chr17:43484200-43485800 Enhancers Duodenum Mucosa Duodenum
44 chr17:43484200-43492400 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr17:43484400-43485600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr17:43484400-43485800 Enhancers Primary Natural Killer cells fromperipheralblood blood
47 chr17:43484400-43485800 Enhancers Primary T killer memory cells from peripheral blood blood
48 chr17:43484400-43485800 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr17:43484400-43488000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
50 chr17:43484400-43488600 Flanking Active TSS Primary B cells from cord blood blood

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