The 2.0 version of rSNPBase

Variant report

Variant rs17631676
Chromosome Location chr17:43549526-43549527
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43510800-43567200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr17:43515600-43549600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr17:43517000-43549800 Weak transcription Left Ventricle heart
4 chr17:43518000-43552600 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr17:43518200-43552200 Weak transcription Rectal Smooth Muscle rectum
6 chr17:43518400-43549600 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr17:43519600-43564600 Weak transcription HSMMtube muscle
8 chr17:43523000-43567200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr17:43523800-43560000 Weak transcription NHDF-Ad bronchial
10 chr17:43524400-43567000 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr17:43527600-43556800 Weak transcription Fetal Lung lung
12 chr17:43529000-43560000 Weak transcription Primary hematopoietic stem cells blood
13 chr17:43529000-43566600 Weak transcription Colon Smooth Muscle Colon
14 chr17:43531400-43550000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr17:43531600-43551800 Weak transcription Placenta Amnion Placenta Amnion
16 chr17:43531600-43552400 Weak transcription Aorta Aorta
17 chr17:43532000-43549800 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr17:43532000-43552400 Weak transcription Right Ventricle heart
19 chr17:43533800-43553800 Weak transcription Fetal Brain Female brain
20 chr17:43534000-43552200 Weak transcription Brain Hippocampus Middle brain
21 chr17:43534000-43554200 Weak transcription Brain Germinal Matrix brain
22 chr17:43534000-43559000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr17:43534200-43549600 Weak transcription Brain Inferior Temporal Lobe brain
24 chr17:43534200-43549800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr17:43534200-43552400 Weak transcription Brain Angular Gyrus brain
26 chr17:43534400-43552200 Weak transcription Fetal Muscle Leg muscle
27 chr17:43539600-43549600 Weak transcription HepG2 liver
28 chr17:43539600-43551800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr17:43539600-43555000 Weak transcription NHLF lung
30 chr17:43539800-43552200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr17:43539800-43564800 Weak transcription HSMM muscle
32 chr17:43540000-43549800 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr17:43540000-43550000 Weak transcription Muscle Satellite Cultured Cells --
34 chr17:43540000-43555000 Weak transcription A549 lung
35 chr17:43540200-43552400 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr17:43540200-43552400 Weak transcription Osteobl bone
37 chr17:43540200-43566600 Weak transcription Primary T killer naive cells fromperipheralblood blood
38 chr17:43540200-43567200 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr17:43540200-43567200 Weak transcription GM12878-XiMat blood
40 chr17:43540800-43549600 Weak transcription HUVEC blood vessel
41 chr17:43540800-43552400 Weak transcription Colonic Mucosa Colon
42 chr17:43540800-43556000 Strong transcription Monocytes-CD14+_RO01746 blood
43 chr17:43542000-43550000 Weak transcription Fetal Intestine Large intestine
44 chr17:43543600-43555000 Weak transcription H9 Cell Line embryonic stem cell
45 chr17:43546000-43549600 Weak transcription Primary B cells from peripheral blood blood
46 chr17:43546000-43549600 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr17:43546000-43549600 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr17:43546000-43549800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr17:43546000-43552400 Weak transcription Primary T cells from cord blood blood
50 chr17:43546200-43549600 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015