The 2.0 version of rSNPBase

Variant report

Variant rs62065392
Chromosome Location chr17:43539035-43539036
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43510200-43548200 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr17:43510400-43539200 Weak transcription Osteobl bone
3 chr17:43510800-43567200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr17:43515600-43539200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr17:43515600-43549600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr17:43517000-43549800 Weak transcription Left Ventricle heart
7 chr17:43518000-43552600 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr17:43518200-43548600 Weak transcription Fetal Kidney kidney
9 chr17:43518200-43552200 Weak transcription Rectal Smooth Muscle rectum
10 chr17:43518400-43549600 Weak transcription HUES6 Cell Line embryonic stem cell
11 chr17:43519600-43564600 Weak transcription HSMMtube muscle
12 chr17:43523000-43567200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr17:43523800-43546400 Weak transcription Pancreas Pancrea
14 chr17:43523800-43560000 Weak transcription NHDF-Ad bronchial
15 chr17:43524000-43539200 Weak transcription NH-A brain
16 chr17:43524400-43567000 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr17:43525000-43539400 Weak transcription HSMM muscle
18 chr17:43527600-43556800 Weak transcription Fetal Lung lung
19 chr17:43527800-43539200 Weak transcription NHLF lung
20 chr17:43527800-43546000 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr17:43528000-43544800 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr17:43528200-43545200 Weak transcription Primary T cells from cord blood blood
23 chr17:43529000-43541400 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr17:43529000-43560000 Weak transcription Primary hematopoietic stem cells blood
25 chr17:43529000-43566600 Weak transcription Colon Smooth Muscle Colon
26 chr17:43530800-43545400 Weak transcription Dnd41 blood
27 chr17:43531400-43550000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr17:43531600-43540000 Weak transcription Colonic Mucosa Colon
29 chr17:43531600-43551800 Weak transcription Placenta Amnion Placenta Amnion
30 chr17:43531600-43552400 Weak transcription Aorta Aorta
31 chr17:43531800-43540600 Weak transcription Fetal Intestine Large intestine
32 chr17:43532000-43545400 Weak transcription Fetal Muscle Trunk muscle
33 chr17:43532000-43549800 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr17:43532000-43552400 Weak transcription Right Ventricle heart
35 chr17:43532600-43539200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr17:43532800-43539200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr17:43533400-43545400 Weak transcription Esophagus oesophagus
38 chr17:43533800-43545400 Weak transcription Liver Liver
39 chr17:43533800-43553800 Weak transcription Fetal Brain Female brain
40 chr17:43534000-43539200 Weak transcription Muscle Satellite Cultured Cells --
41 chr17:43534000-43545200 Weak transcription Ovary ovary
42 chr17:43534000-43545400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr17:43534000-43545400 Weak transcription Brain Substantia Nigra brain
44 chr17:43534000-43545400 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr17:43534000-43545600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr17:43534000-43545600 Weak transcription Brain Anterior Caudate brain
47 chr17:43534000-43545600 Weak transcription Gastric stomach
48 chr17:43534000-43552200 Weak transcription Brain Hippocampus Middle brain
49 chr17:43534000-43554200 Weak transcription Brain Germinal Matrix brain
50 chr17:43534000-43559000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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Last update: Aug 31, 2015