Variant report

Variant	rs34104358
Chromosome Location	chr17:43508616-43508617
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr17:43508103-43509362	GM12892	blood:	n/a	n/a
2	GABPA	chr17:43508475-43508830	K562	blood:	n/a	n/a
3	STAT5A	chr17:43508443-43508767	GM12878	blood:	n/a	chr17:43508721-43508733
4	POLR2A	chr17:43508552-43509337	GM12891	blood:	n/a	n/a
5	CHD2	chr17:43508577-43508916	GM12878	blood:	n/a	n/a
6	POLR2A	chr17:43508176-43509475	GM18951	blood:	n/a	n/a
7	GABPA	chr17:43508253-43509131	MCF-7	breast:	n/a	n/a
8	RUNX3	chr17:43508110-43509235	GM12878	blood:	n/a	n/a
9	MAX	chr17:43507960-43509667	ECC-1	luminal epithelium:	n/a	n/a
10	MAX	chr17:43508075-43509532	MCF-7	breast:	n/a	n/a
11	EP300	chr17:43507972-43509208	ECC-1	luminal epithelium:	n/a	chr17:43508438-43508454 chr17:43508418-43508427 chr17:43508679-43508686 chr17:43508950-43508959
12	MAX	chr17:43508060-43509374	ECC-1	luminal epithelium:	n/a	n/a
13	TBL1XR1	chr17:43508515-43508707	GM12878	blood:	n/a	n/a
14	POLR2A	chr17:43508138-43509344	GM18505	blood:	n/a	n/a
15	SIN3A	chr17:43507914-43509808	H1-hESC	embryonic stem cell:	n/a	n/a
16	GABPA	chr17:43508232-43509032	MCF-7	breast:	n/a	n/a
17	ZBTB7A	chr17:43508508-43509337	K562	blood:	n/a	chr17:43508799-43508807 chr17:43508951-43508960
18	HEY1	chr17:43508524-43509198	HepG2	liver:	n/a	chr17:43508583-43508598
19	NR2F2	chr17:43508043-43509586	MCF-7	breast:	n/a	n/a
20	TCF12	chr17:43507914-43509354	ECC-1	luminal epithelium:	n/a	chr17:43508456-43508466
21	YY1	chr17:43508535-43509096	ECC-1	luminal epithelium:	n/a	chr17:43508584-43508595 chr17:43509032-43509046
22	MTA3	chr17:43507955-43509227	GM12878	blood:	n/a	n/a
23	POLR2A	chr17:43508600-43509340	GM12878	blood:	n/a	n/a
24	MAZ	chr17:43508134-43509349	GM12878	blood:	n/a	n/a
25	GABPA	chr17:43508577-43508797	HepG2	liver:	n/a	n/a
26	YY1	chr17:43508594-43508834	GM12878	blood:	n/a	n/a
27	POLR2A	chr17:43508502-43509644	ECC-1	luminal epithelium:	n/a	n/a
28	ELK1	chr17:43508555-43508887	GM12878	blood:	n/a	chr17:43508678-43508687 chr17:43508678-43508687
29	POLR2A	chr17:43508169-43509434	GM15510	blood:	n/a	n/a
30	POLR2A	chr17:43508560-43510553	MCF-7	breast:	n/a	n/a
31	SIN3AK20	chr17:43507950-43509626	MCF-7	breast:	n/a	n/a
32	ZBTB7A	chr17:43507932-43509271	ECC-1	luminal epithelium:	n/a	chr17:43508799-43508807 chr17:43508951-43508960
33	ELF1	chr17:43508554-43508861	K562	blood:	n/a	chr17:43508674-43508687 chr17:43508720-43508733 chr17:43508676-43508687
34	MAX	chr17:43508555-43509665	A549	lung:	n/a	n/a
35	ELF1	chr17:43508341-43509344	GM12878	blood:	n/a	chr17:43508674-43508687 chr17:43508720-43508733 chr17:43509027-43509039 chr17:43508886-43508895 chr17:43508676-43508687
36	ELF1	chr17:43508512-43508844	HepG2	liver:	n/a	chr17:43508674-43508687 chr17:43508720-43508733 chr17:43508676-43508687
37	MAX	chr17:43508543-43509327	GM12878	blood:	n/a	n/a
38	ELF1	chr17:43508529-43509120	GM12878	blood:	n/a	chr17:43508674-43508687 chr17:43508720-43508733 chr17:43509027-43509039 chr17:43508886-43508895 chr17:43508676-43508687
39	MAX	chr17:43508548-43509250	H1-hESC	embryonic stem cell:	n/a	n/a
40	EP300	chr17:43508598-43509327	T-47D	breast:	n/a	chr17:43508679-43508686 chr17:43508950-43508959
41	ZBTB7A	chr17:43507830-43509221	ECC-1	luminal epithelium:	n/a	chr17:43508799-43508807 chr17:43508951-43508960
42	RCOR1	chr17:43508579-43508818	GM12878	blood:	n/a	n/a
43	RUNX3	chr17:43508129-43509101	GM12878	blood:	n/a	n/a
44	ZBTB7A	chr17:43508569-43508852	HepG2	liver:	n/a	chr17:43508799-43508807
45	ELF1	chr17:43508504-43508847	K562	blood:	n/a	chr17:43508674-43508687 chr17:43508720-43508733 chr17:43508676-43508687
46	POLR2A	chr17:43508604-43509329	GM12878	blood:	n/a	n/a
47	POLR2A	chr17:43508095-43509354	GM19193	blood:	n/a	n/a
48	MXI1	chr17:43508192-43509212	GM12878	blood:	n/a	chr17:43508456-43508465
49	POLR2A	chr17:43508129-43509430	GM19099	blood:	n/a	n/a
50	POLR2A	chr17:43508301-43509539	GM12878	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr17:43491389..43493065-chr17:43507690..43509408,2	MCF-7	breast:
2	chr17:43501401..43503182-chr17:43508338..43510884,3	MCF-7	breast:
3	chr17:43506157..43512040-chr17:43512446..43519071,9	MCF-7	breast:
4	chr17:43209603..43212111-chr17:43507781..43510715,2	MCF-7	breast:
5	chr17:43392748..43395786-chr17:43508112..43511111,3	MCF-7	breast:
6	chr17:43501715..43503974-chr17:43507657..43510348,3	MCF-7	breast:
7	chr17:43507001..43509385-chr17:43510815..43513693,2	K562	blood:
8	chr17:43508394..43510622-chr17:43970082..43971846,2	MCF-7	breast:
9	chr17:43507648..43509676-chr17:43511432..43515176,4	K562	blood:

Variant related genes	Relation type
ARHGAP27	TF binding region
ENSG00000186868	Chromatin interaction
ENSG00000006062	Chromatin interaction
ENSG00000161714	Chromatin interaction
ENSG00000159314	Chromatin interaction
ENSG00000181513	Chromatin interaction
ENSG00000225190	Chromatin interaction

Extended variants
information (count: 408 )
Associated
traits (count: 6 )

rSNPs within LD-proxies of this variant (count:359)

rs_ID	r²[population]
rs11012	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1105569	1.00[ASN][1000 genomes]
rs1105570	1.00[ASN][1000 genomes]
rs1105571	1.00[ASN][1000 genomes]
rs12452273	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12939187	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12940792	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12942666	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12942951	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12946723	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12946900	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12947718	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12949256	0.82[EUR][1000 genomes]
rs12950965	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12952504	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12952764	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1568949	1.00[ASN][1000 genomes]
rs1568950	1.00[ASN][1000 genomes]
rs1568951	1.00[ASN][1000 genomes]
rs16940633	1.00[ASN][1000 genomes]
rs1706748	1.00[ASN][1000 genomes]
rs17631303	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17631676	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17686610	1.00[ASN][1000 genomes]
rs17687462	1.00[ASN][1000 genomes]
rs17687504	1.00[ASN][1000 genomes]
rs17687534	1.00[ASN][1000 genomes]
rs17687571	1.00[ASN][1000 genomes]
rs17687625	1.00[ASN][1000 genomes]
rs17687667	1.00[ASN][1000 genomes]
rs17687740	1.00[ASN][1000 genomes]
rs17687838	1.00[ASN][1000 genomes]
rs17687849	1.00[ASN][1000 genomes]
rs17688002	1.00[ASN][1000 genomes]
rs17688032	1.00[ASN][1000 genomes]
rs17688056	1.00[ASN][1000 genomes]
rs17688068	1.00[ASN][1000 genomes]
rs17688090	1.00[ASN][1000 genomes]
rs17688126	1.00[ASN][1000 genomes]
rs17688205	1.00[ASN][1000 genomes]
rs17688249	1.00[ASN][1000 genomes]
rs17688296	1.00[ASN][1000 genomes]
rs17688767	1.00[ASN][1000 genomes]
rs17688773	1.00[ASN][1000 genomes]
rs17688875	1.00[ASN][1000 genomes]
rs17688916	1.00[ASN][1000 genomes]
rs17688922	1.00[ASN][1000 genomes]
rs17688944	1.00[ASN][1000 genomes]
rs17689104	1.00[ASN][1000 genomes]
rs17689116	1.00[ASN][1000 genomes]
rs17689182	1.00[ASN][1000 genomes]
rs17689218	1.00[ASN][1000 genomes]
rs17760577	1.00[ASN][1000 genomes]
rs17760631	1.00[ASN][1000 genomes]
rs17760733	1.00[ASN][1000 genomes]
rs17760817	1.00[ASN][1000 genomes]
rs17761046	1.00[ASN][1000 genomes]
rs17761100	1.00[ASN][1000 genomes]
rs17761124	1.00[ASN][1000 genomes]
rs17761207	1.00[ASN][1000 genomes]
rs17761387	1.00[ASN][1000 genomes]
rs17761581	1.00[ASN][1000 genomes]
rs17762073	1.00[ASN][1000 genomes]
rs17762165	1.00[ASN][1000 genomes]
rs17762308	1.00[ASN][1000 genomes]
rs17762361	1.00[ASN][1000 genomes]
rs17762535	1.00[ASN][1000 genomes]
rs1808189	0.87[EUR][1000 genomes]
rs1879581	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1879582	1.00[ASN][1000 genomes]
rs1879583	0.81[EUR][1000 genomes]
rs1879585	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1879586	1.00[ASN][1000 genomes]
rs1880749	1.00[ASN][1000 genomes]
rs1880750	1.00[ASN][1000 genomes]
rs1880752	1.00[ASN][1000 genomes]
rs1971374	1.00[ASN][1000 genomes]
rs2028078	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2077606	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2090847	0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2139890	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2253488	1.00[ASN][1000 genomes]
rs241020	1.00[ASN][1000 genomes]
rs241021	1.00[ASN][1000 genomes]
rs241028	1.00[ASN][1000 genomes]
rs241032	1.00[ASN][1000 genomes]
rs241033	1.00[ASN][1000 genomes]
rs241041	1.00[ASN][1000 genomes]
rs2458179	1.00[ASN][1000 genomes]
rs2458187	1.00[ASN][1000 genomes]
rs2462835	1.00[ASN][1000 genomes]
rs2463523	1.00[ASN][1000 genomes]
rs2668644	1.00[ASN][1000 genomes]
rs2684526	1.00[ASN][1000 genomes]
rs2693359	1.00[ASN][1000 genomes]
rs2693362	1.00[ASN][1000 genomes]
rs2942164	1.00[ASN][1000 genomes]
rs2942165	1.00[ASN][1000 genomes]
rs2942166	1.00[ASN][1000 genomes]
rs2942167	1.00[ASN][1000 genomes]
rs2942168	1.00[ASN][1000 genomes]
rs2942169	1.00[ASN][1000 genomes]
rs2942170	1.00[ASN][1000 genomes]
rs2959992	1.00[ASN][1000 genomes]
rs2960000	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3108317	1.00[ASN][1000 genomes]
rs34018943	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34063617	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3418	1.00[ASN][1000 genomes]
rs34286926	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34363898	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34465449	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34792542	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34887474	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34915103	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35327136	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35389313	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35489312	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35519908	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35626715	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs35884427	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36078910	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36114997	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs365825	1.00[ASN][1000 genomes]
rs383241	1.00[ASN][1000 genomes]
rs385691	1.00[ASN][1000 genomes]
rs389217	1.00[ASN][1000 genomes]
rs389978	1.00[ASN][1000 genomes]
rs392116	1.00[ASN][1000 genomes]
rs393152	1.00[ASN][1000 genomes]
rs393675	1.00[ASN][1000 genomes]
rs393838	1.00[ASN][1000 genomes]
rs3946526	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs396593	1.00[ASN][1000 genomes]
rs3972613	1.00[ASN][1000 genomes]
rs413778	1.00[ASN][1000 genomes]
rs413917	1.00[ASN][1000 genomes]
rs422112	1.00[ASN][1000 genomes]
rs424243	1.00[ASN][1000 genomes]
rs434428	1.00[ASN][1000 genomes]
rs434598	1.00[ASN][1000 genomes]
rs434805	1.00[ASN][1000 genomes]
rs434971	1.00[ASN][1000 genomes]
rs439558	1.00[ASN][1000 genomes]
rs4401083	1.00[ASN][1000 genomes]
rs4479288	1.00[ASN][1000 genomes]
rs4479289	1.00[ASN][1000 genomes]
rs448830	1.00[ASN][1000 genomes]
rs4605208	1.00[ASN][1000 genomes]
rs4609898	1.00[ASN][1000 genomes]
rs4763	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs5026246	1.00[ASN][1000 genomes]
rs55642947	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55643511	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55648326	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55651627	1.00[ASN][1000 genomes]
rs55652155	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55653963	1.00[ASN][1000 genomes]
rs55663797	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55669046	1.00[ASN][1000 genomes]
rs55671319	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55688739	1.00[ASN][1000 genomes]
rs55703888	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55746869	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55787734	1.00[ASN][1000 genomes]
rs55790407	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55793500	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55849973	1.00[ASN][1000 genomes]
rs55896111	1.00[ASN][1000 genomes]
rs55914643	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55925547	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55962674	1.00[ASN][1000 genomes]
rs55972157	1.00[ASN][1000 genomes]
rs55973918	1.00[ASN][1000 genomes]
rs55974014	1.00[ASN][1000 genomes]
rs55980621	1.00[ASN][1000 genomes]
rs55989971	1.00[ASN][1000 genomes]
rs56005713	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56015792	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56020833	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs56046792	1.00[ASN][1000 genomes]
rs56062621	1.00[ASN][1000 genomes]
rs56100013	1.00[ASN][1000 genomes]
rs56110538	1.00[ASN][1000 genomes]
rs56159231	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56160448	1.00[ASN][1000 genomes]
rs56167344	1.00[ASN][1000 genomes]
rs56167560	1.00[ASN][1000 genomes]
rs56168933	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56192752	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56205560	1.00[ASN][1000 genomes]
rs56212100	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56220242	1.00[ASN][1000 genomes]
rs56220387	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56236914	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56323722	1.00[ASN][1000 genomes]
rs56323832	1.00[ASN][1000 genomes]
rs56328224	1.00[ASN][1000 genomes]
rs56378631	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56380663	1.00[ASN][1000 genomes]
rs56397077	1.00[ASN][1000 genomes]
rs56400821	1.00[ASN][1000 genomes]
rs56406407	1.00[ASN][1000 genomes]
rs593720	1.00[ASN][1000 genomes]
rs61667602	1.00[ASN][1000 genomes]
rs62053939	1.00[ASN][1000 genomes]
rs62053940	1.00[ASN][1000 genomes]
rs62053943	1.00[ASN][1000 genomes]
rs62053945	1.00[ASN][1000 genomes]
rs62053946	1.00[ASN][1000 genomes]
rs62053947	1.00[ASN][1000 genomes]
rs62053948	1.00[ASN][1000 genomes]
rs62053949	1.00[ASN][1000 genomes]
rs62053950	1.00[ASN][1000 genomes]
rs62053951	1.00[ASN][1000 genomes]
rs62053952	1.00[ASN][1000 genomes]
rs62053953	1.00[ASN][1000 genomes]
rs62053954	1.00[ASN][1000 genomes]
rs62053955	1.00[ASN][1000 genomes]
rs62053956	1.00[ASN][1000 genomes]
rs62053957	1.00[ASN][1000 genomes]
rs62053958	1.00[ASN][1000 genomes]
rs62053959	1.00[ASN][1000 genomes]
rs62054372	1.00[ASN][1000 genomes]
rs62054378	1.00[ASN][1000 genomes]
rs62054384	1.00[ASN][1000 genomes]
rs62054387	1.00[ASN][1000 genomes]
rs62054388	1.00[ASN][1000 genomes]
rs62055660	1.00[ASN][1000 genomes]
rs62055661	1.00[ASN][1000 genomes]
rs62055662	1.00[ASN][1000 genomes]
rs62055663	1.00[ASN][1000 genomes]
rs62055664	1.00[ASN][1000 genomes]
rs62055665	1.00[ASN][1000 genomes]
rs62055689	1.00[ASN][1000 genomes]
rs62055691	1.00[ASN][1000 genomes]
rs62055692	1.00[ASN][1000 genomes]
rs62055693	1.00[ASN][1000 genomes]
rs62055696	1.00[ASN][1000 genomes]
rs62055697	1.00[ASN][1000 genomes]
rs62055698	1.00[ASN][1000 genomes]
rs62055700	1.00[ASN][1000 genomes]
rs62055701	1.00[ASN][1000 genomes]
rs62055702	1.00[ASN][1000 genomes]
rs62055704	1.00[ASN][1000 genomes]
rs62055705	1.00[ASN][1000 genomes]
rs62055707	1.00[ASN][1000 genomes]
rs62055708	1.00[ASN][1000 genomes]
rs62055709	1.00[ASN][1000 genomes]
rs62055710	1.00[ASN][1000 genomes]
rs62055712	1.00[ASN][1000 genomes]
rs62055713	1.00[ASN][1000 genomes]
rs62055714	1.00[ASN][1000 genomes]
rs62055715	1.00[ASN][1000 genomes]
rs62055716	1.00[ASN][1000 genomes]
rs62055717	1.00[ASN][1000 genomes]
rs62055751	1.00[ASN][1000 genomes]
rs62055752	1.00[ASN][1000 genomes]
rs62055753	1.00[ASN][1000 genomes]
rs62055754	1.00[ASN][1000 genomes]
rs62056874	1.00[ASN][1000 genomes]
rs62056875	1.00[ASN][1000 genomes]
rs62056876	1.00[ASN][1000 genomes]
rs62056877	1.00[ASN][1000 genomes]
rs62056878	1.00[ASN][1000 genomes]
rs62056879	1.00[ASN][1000 genomes]
rs62056880	1.00[ASN][1000 genomes]
rs62056881	1.00[ASN][1000 genomes]
rs62056905	1.00[ASN][1000 genomes]
rs62056906	1.00[ASN][1000 genomes]
rs62056908	1.00[ASN][1000 genomes]
rs62056909	1.00[ASN][1000 genomes]
rs62056910	1.00[ASN][1000 genomes]
rs62056911	1.00[ASN][1000 genomes]
rs62056912	1.00[ASN][1000 genomes]
rs62056913	1.00[ASN][1000 genomes]
rs62056915	1.00[ASN][1000 genomes]
rs62056916	1.00[ASN][1000 genomes]
rs62056917	1.00[ASN][1000 genomes]
rs62056918	1.00[ASN][1000 genomes]
rs62056919	1.00[ASN][1000 genomes]
rs62056920	1.00[ASN][1000 genomes]
rs62056921	1.00[ASN][1000 genomes]
rs62056922	1.00[ASN][1000 genomes]
rs62056925	1.00[ASN][1000 genomes]
rs62056926	1.00[ASN][1000 genomes]
rs62056927	1.00[ASN][1000 genomes]
rs62056928	1.00[ASN][1000 genomes]
rs62056929	1.00[ASN][1000 genomes]
rs62056930	1.00[ASN][1000 genomes]
rs62056931	1.00[ASN][1000 genomes]
rs62056932	1.00[ASN][1000 genomes]
rs62056933	1.00[ASN][1000 genomes]
rs62056934	1.00[ASN][1000 genomes]
rs62056935	1.00[ASN][1000 genomes]
rs62056936	1.00[ASN][1000 genomes]
rs62056937	1.00[ASN][1000 genomes]
rs62056939	1.00[ASN][1000 genomes]
rs62056940	1.00[ASN][1000 genomes]
rs62056946	1.00[ASN][1000 genomes]
rs62064364	1.00[ASN][1000 genomes]
rs62064597	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064598	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064600	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064603	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064637	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064641	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064643	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064645	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064646	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs62064647	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064649	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064651	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62064652	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62064653	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064654	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064655	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064657	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065374	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065376	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065377	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065378	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065379	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065380	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065385	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065389	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065391	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065392	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065393	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs62065399	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065403	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065404	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065436	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065437	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065438	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065441	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065442	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065444	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065445	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065447	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065448	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065449	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065452	1.00[ASN][1000 genomes]
rs62065453	1.00[ASN][1000 genomes]
rs62065459	1.00[ASN][1000 genomes]
rs62066128	1.00[ASN][1000 genomes]
rs62066460	1.00[ASN][1000 genomes]
rs71238846	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71373560	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71373572	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7209501	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7220206	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7222389	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7222444	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73984391	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7502718	1.00[ASN][1000 genomes]
rs7502937	1.00[ASN][1000 genomes]
rs8071011	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9730	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:49 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431632	chr17:43199763-43733983	Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	210 gene(s)	inside rSNPs	diseases
2	nsv431633	chr17:43199763-43772540	Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	210 gene(s)	inside rSNPs	diseases
3	nsv431634	chr17:43346980-43659975	Weak transcription Active TSS Enhancers Genic enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
4	nsv431636	chr17:43403005-43659881	Active TSS Genic enhancers Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
5	esv2754858	chr17:43403005-43666906	Weak transcription Flanking Bivalent TSS/Enh Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
6	nsv431637	chr17:43403005-43716885	Genic enhancers Strong transcription Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
7	nsv428342	chr17:43443554-43651084	Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
8	esv2757659	chr17:43457886-43733983	Enhancers Flanking Active TSS Genic enhancers Strong transcription Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
9	esv2758691	chr17:43457886-43816023	Enhancers Flanking Active TSS Genic enhancers Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
10	esv2755280	chr17:43459697-43666906	Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
11	nsv908304	chr17:43467025-43524511	Enhancers Genic enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
12	nsv1065930	chr17:43467291-44151468	Weak transcription Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
13	nsv431638	chr17:43470156-43693538	Strong transcription Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
14	esv2755741	chr17:43470760-43655688	Bivalent/Poised TSS Strong transcription Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
15	nsv431639	chr17:43470760-43659355	Bivalent Enhancer Enhancers Weak transcription Genic enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
16	esv2754089	chr17:43470760-43659881	Enhancers Weak transcription Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
17	esv34266	chr17:43470760-43659975	Enhancers Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
18	esv34577	chr17:43470760-43659975	Genic enhancers Weak transcription Bivalent/Poised TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
19	esv2752564	chr17:43470760-43659975	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
20	esv2753343	chr17:43470760-43659975	Enhancers Bivalent Enhancer Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
21	esv2753852	chr17:43470760-43659975	Active TSS Strong transcription Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
22	esv2754692	chr17:43470760-43659975	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
23	esv2754773	chr17:43470760-43659975	Strong transcription Bivalent Enhancer Enhancers Genic enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
24	esv2754821	chr17:43470760-43659975	Genic enhancers Strong transcription Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
25	esv2755261	chr17:43470760-43659975	Flanking Bivalent TSS/Enh Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
26	esv2755434	chr17:43470760-43659975	Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
27	esv2755618	chr17:43470760-43659975	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
28	esv2756206	chr17:43470760-43659975	Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
29	esv2756211	chr17:43470760-43659975	Bivalent/Poised TSS Active TSS Strong transcription Flanking Active TSS Enhancers Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
30	esv2756238	chr17:43470760-43659975	Weak transcription Strong transcription Genic enhancers Enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
31	esv2756640	chr17:43470760-43659975	Flanking Active TSS Genic enhancers Strong transcription Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
32	esv34307	chr17:43470760-43666906	Enhancers Genic enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
33	esv2755466	chr17:43470760-43666906	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
34	esv2756448	chr17:43470760-43666906	Weak transcription Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
35	nsv431640	chr17:43470760-43666906	Weak transcription Enhancers Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
36	esv2753768	chr17:43470760-43734304	Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
37	esv2754725	chr17:43470760-43741452	Flanking Active TSS Strong transcription Enhancers Genic enhancers Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
38	esv2752397	chr17:43485791-43659975	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
39	esv2753431	chr17:43485791-43659975	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
40	esv2755266	chr17:43485791-43659975	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
41	esv2755477	chr17:43485791-43659975	Enhancers Strong transcription Weak transcription Bivalent/Poised TSS Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
42	esv2755480	chr17:43485791-43659975	Weak transcription Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
43	esv2756392	chr17:43485791-43659975	Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
44	nsv431641	chr17:43485791-43659975	Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
45	esv35084	chr17:43485791-43666906	Flanking Bivalent TSS/Enh Weak transcription Active TSS Enhancers Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
46	esv2754833	chr17:43485791-43666906	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
47	nsv431643	chr17:43485791-43666906	Enhancers Bivalent/Poised TSS Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
48	nsv431642	chr17:43485791-43716885	Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
49	esv3419760	chr17:43504769-43509567	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region	9 gene(s)	inside rSNPs	diseases

mRNA abundance (count:6)

SNP	Gene	Cis/trans	Tissue	Source
rs34104358	LRRC37A4	cis	multi-tissue	Pritchard
rs34104358	ARHGAP27	Cis_1M	lymphoblastoid	RTeQTL
rs34104358	ARL17	Cis_1M	lymphoblastoid	RTeQTL
rs34104358	LRRC37A4	Cis_1M	lymphoblastoid	RTeQTL
rs34104358	MAPK8IP1	trans	lymphoblastoid	RTeQTL
rs34104358	LOC644246	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:43506000-43510400	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
2	chr17:43506000-43510600	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
3	chr17:43506200-43510400	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
4	chr17:43506400-43510600	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
5	chr17:43507400-43509000	Flanking Bivalent TSS/Enh	HepG2	liver
6	chr17:43507600-43509200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
7	chr17:43507800-43508800	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr17:43507800-43508800	Flanking Bivalent TSS/Enh	Colon Smooth Muscle	Colon
9	chr17:43507800-43508800	Flanking Active TSS	GM12878-XiMat	blood
10	chr17:43507800-43509000	Flanking Bivalent TSS/Enh	Duodenum Smooth Muscle	Duodenum
11	chr17:43507800-43509000	Flanking Bivalent TSS/Enh	Fetal Intestine Small	intestine
12	chr17:43507800-43509000	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
13	chr17:43507800-43509200	Flanking Bivalent TSS/Enh	Fetal Intestine Large	intestine
14	chr17:43507800-43510200	Flanking Bivalent TSS/Enh	Stomach Smooth Muscle	stomach
15	chr17:43507800-43510600	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
16	chr17:43507800-43510600	Active TSS	Esophagus	oesophagus
17	chr17:43507800-43511000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr17:43508000-43508800	Flanking Bivalent TSS/Enh	Primary T cells fromperipheralblood	blood
19	chr17:43508000-43508800	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
20	chr17:43508000-43509000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
21	chr17:43508000-43509000	Flanking Active TSS	Primary B cells from peripheral blood	blood
22	chr17:43508000-43509000	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
23	chr17:43508000-43509000	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
24	chr17:43508000-43509000	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
25	chr17:43508000-43509000	Flanking Bivalent TSS/Enh	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr17:43508000-43509000	Bivalent/Poised TSS	Brain Substantia Nigra	brain
27	chr17:43508000-43509200	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
28	chr17:43508000-43509200	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr17:43508000-43509200	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin01	Skin
30	chr17:43508000-43509200	Flanking Bivalent TSS/Enh	Brain Hippocampus Middle	brain
31	chr17:43508000-43509200	Flanking Active TSS	Right Ventricle	heart
32	chr17:43508000-43509200	Flanking Active TSS	HMEC	breast
33	chr17:43508000-43510000	Flanking Active TSS	Primary hematopoietic stem cells	blood
34	chr17:43508000-43510000	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
35	chr17:43508000-43510000	Flanking Bivalent TSS/Enh	Ganglion Eminence derived primary cultured neurospheres	brain
36	chr17:43508000-43510000	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr17:43508000-43510000	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin03	Skin
38	chr17:43508000-43510000	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland
39	chr17:43508000-43510000	Flanking Bivalent TSS/Enh	Fetal Muscle Leg	muscle
40	chr17:43508000-43510000	Flanking Bivalent TSS/Enh	Fetal Stomach	stomach
41	chr17:43508000-43510000	Flanking Bivalent TSS/Enh	Skeletal Muscle Male	skeletal muscle
42	chr17:43508000-43510600	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
43	chr17:43508000-43510600	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
44	chr17:43508000-43510800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
45	chr17:43508200-43508800	Flanking Bivalent TSS/Enh	H1 Derived Mesenchymal Stem Cells	ES cell derived
46	chr17:43508200-43508800	Bivalent Enhancer	Brain Cingulate Gyrus	brain
47	chr17:43508200-43508800	Bivalent Enhancer	Brain Germinal Matrix	brain
48	chr17:43508200-43508800	Bivalent Enhancer	Fetal Heart	heart
49	chr17:43508200-43508800	Flanking Bivalent TSS/Enh	NHLF	lung
50	chr17:43508200-43509000	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--

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